Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01110 ATGGGTTTGAAGGAGGATTTTGAGGAGCATGCTGCAAAAGTCAAGACTCTTAAAGAGAGCCCATCAAATGAAGACTTGCTTATCCTTTATGGTTTGTTTAAGCAAGCCACTGTTGGACCTGTCGACACCAGTCGTCCTGGAATATTCAACATGAGGGACAGAGCTAAATGGGATGCATGGAAGGCTGTTGAAGCGAAATCCAAGGAGGAAGCAATGAGCGATTACATCACTAAGGTGAAACAGCTGCTGGAAGCAGCCGGCATTcctatttga 273 0.4432 MGLKEDFEEHAAKVKTLKESPSNEDLLILYGLFKQATVGPVDTSRPGIFNMRDRAKWDAWKAVEAKSKEEAMSDYITKVKQLLEAAGIPI 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01110 90 Pfam Acyl CoA binding protein 5 79 IPR000582 GO:0000062
Tsu05g01110 90 PANTHER BNAANNG25690D PROTEIN 1 86 - -
Tsu05g01110 90 PANTHER ACYL-COA-BINDING PROTEIN, ACBP 1 86 - -
Tsu05g01110 90 ProSitePatterns Acyl-CoA-binding (ACB) domain signature. 21 39 IPR022408 -
Tsu05g01110 90 PRINTS Acyl-coA-binding protein signature 44 59 IPR000582 GO:0000062
Tsu05g01110 90 PRINTS Acyl-coA-binding protein signature 65 82 IPR000582 GO:0000062
Tsu05g01110 90 PRINTS Acyl-coA-binding protein signature 21 39 IPR000582 GO:0000062
Tsu05g01110 90 PRINTS Acyl-coA-binding protein signature 4 19 IPR000582 GO:0000062
Tsu05g01110 90 SUPERFAMILY Acyl-CoA binding protein 3 84 IPR035984 GO:0000062
Tsu05g01110 90 CDD ACBP 3 87 IPR000582 GO:0000062
Tsu05g01110 90 Gene3D - 1 88 IPR014352 -
Tsu05g01110 90 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 3 88 IPR000582 GO:0000062
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01110 1 87 Acyl Lipid Metabolism Gene Families AT1G31812 80.460 4.72e-49 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01110 K08762 - gmx:100500327 156.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01110 05 9720478 9723600 Tsu05g01110 05 9720478 9723600 ECH