Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01105 ATGGCAGAACAAGAACAAAACGAACACGAACAAATCAACAAGCTATTTTCTTCATACATAGGTATAAGCTTCTCCGTTTTCATAGCACTTCTTCCTAACAATCTTCGAGAACATTCTCTTAGAGCTTTCCGTGCAGAAGAAGAGCTACGTCAGATAAAATCACGCCGACAAGAAGATTACAAAGCAAACGCAAGAGTCGCTGAGATCTTCGCTTCTCATAGAAACTCATGGCGTGATGATGAGAAACGTCTTTTACGGCGAATCGACGCCGCATCGGAAGAAATCGTTAGATTAAGAGCGGTGGTTGAAGATTCTAAAGCGCGTGTGGAAGATTTAGAGCGTGAGGTTGTTGAAAGAGATGAGATGATTGCGTTTATTTCGAGACGGTTTCAAGAGGAGGGATTAGGTGGGTGTGGGAGTAGGGGAAGTTATGGTGTGGAAGAAATGGTGGGGACCACTAATGTTGTTGATGAAGAAGTTGATGTTATCTATCAACAACATAGTCAGCAGCAGCATCTTAATAATGGATTTGATTCTGAGTTTATTGCTTCTTCTGGTTCTAAGTTTTGGGCTGAAAAAGCTTCATTATGGCAGGATGTACAGTATGAATCCGTTGAATCAATGTATACAACAAAACAATTTGTAGCAAGAAGGGAGTCCCCCTGGAAGGTAGACGGTGATTCAGCTGGAGTTTCGGCTAAACTTAAATTACTTGAACATGAATTGATAAATCTGGACAAAGTTGGTAAGGATTTTCCGTCCAAGGTGTCATCCTCAATTAAGAAGCAGGCAAAGAGATATCAATCGCTTtcagaaaaaattgatgatttATGCAGACGTATAGCTAGTGATCCCTGCGATCCCTCCCTTGGTTCAGAATTtcgaacccaaactcaaacaGAGTTTTTGCTGGAAGCATTCCGGCTTCAACAGGATGCATCTGAAACTGGACAGAAACTAATGGCATTACACACCGAAGTCGGGAAGACCCATTACAGGGATGAGTTAAGAGGCGAGACCACACTAACCACAAGACGGTCTTTGGACTCAATTCGGAACAACTTCAGAGAACTCCAGCGAAATCTGGAGATATGGTTGGCCAGAATCATCGGTGATCTCGAGGGGATTCTGGCAAGGGACGGTGCATCTCGTGTAAGAGAATATTACATTTCTAGATATCCTTTTGTTCAATAG 1194 0.4129 MAEQEQNEHEQINKLFSSYIGISFSVFIALLPNNLREHSLRAFRAEEELRQIKSRRQEDYKANARVAEIFASHRNSWRDDEKRLLRRIDAASEEIVRLRAVVEDSKARVEDLEREVVERDEMIAFISRRFQEEGLGGCGSRGSYGVEEMVGTTNVVDEEVDVIYQQHSQQQHLNNGFDSEFIASSGSKFWAEKASLWQDVQYESVESMYTTKQFVARRESPWKVDGDSAGVSAKLKLLEHELINLDKVGKDFPSKVSSSIKKQAKRYQSLSEKIDDLCRRIASDPCDPSLGSEFRTQTQTEFLLEAFRLQQDASETGQKLMALHTEVGKTHYRDELRGETTLTTRRSLDSIRNNFRELQRNLEIWLARIIGDLEGILARDGASRVREYYISRYPFVQ 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01105 397 Coils Coil 260 280 - -
Tsu05g01105 397 Coils Coil 35 55 - -
Tsu05g01105 397 PANTHER EXPRESSED PROTEIN 3 397 - -
Tsu05g01105 397 Coils Coil 348 368 - -
Tsu05g01105 397 Coils Coil 74 122 - -
Tsu05g01105 397 PANTHER RIBONUCLEASE P PROTEIN SUBUNIT P38-LIKE PROTEIN 3 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01105 Tsu-Chr5 9706824 9710748 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01105 - - mtr:MTR_5g026680 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01105 05 9706824 9710748 Tsu05g01105 05 9706824 9710748 ECH