Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01101 ATGATGATGAGACAACAAGGTGGTACTATGAACACTGCAATGTTTTTGGCTAAGAAGGGTTTGTTAGGTGCTTCTGAAACTGTTCCTAACAAATGGGGTTCTTTGGTTAGAGGAACAACTCCTCTTGTTAGGAATGGAAGTACTTTTGCTGCTAATCTGTCAGATCAGAAGGAGGACAAGAAGAATCCTCCTTCTCCTCAAGGTAGTGCTGGTGGTAACAAAGATGAAAAGGGTATTATGAGTTATTGGGGTATTCAGTCTTCTAAGATCACAAAACAAGATGGTACTGAATGGAAGTGGAATTGTTTTAGGCCATGGGAGACATACAAAGCAGATGTTACTATTGATCTGACTAAACATCACAAACCAACAACTTTTCTGGACAAGATGGCTTATTGGACTGTTAAGAGTCTTAGGTTCCCAACTGATGTCTTTTTCCAGAGAAGGTATGGATGCCGAGCAATGATGCTTGAGACAGTAGCAGCTGTTCCTGGCATGGTGGGAGGAATGCTACTTCACTGCAAATCATTGCGCCGATTTGAGCACAGTGGTGGATGGATCAAAGCATTGCTAGAAGAAGCAGAGAATGAAAGGATGCACCTAATGACTTTCATGGAAGTAGCAAAACCGAGATGGTATGAGCGTGCTCTAGTCATAACTGTCCAAGGTGTTTTCTTCAATGCTTATTTCTTAGGCTATTTGATCTCACCCAAATTTGCACACCGTATGGTTGGTTACCTTGAGGAAGAAGCTATCCACTCATACACTGAGTTTCTTAAGGAGCTTGATAAAGGCAATATAGAAAATGTTCCTGCTCCAGCCATTGCTATTGACTATTGGCAGCTTCCCCCAAACTCTACTTTAAGGGATGTTGTTATGGTTGTCAGAGCTGATGAAGCACATCATCGCGATGTCAACCACTTTGCATCAGATATCCATTACCAAGGAAGAGAGTTAAGAGAGGCTGCTGCTCCAATTGGTTATCACTAG 990 0.4212 MMMRQQGGTMNTAMFLAKKGLLGASETVPNKWGSLVRGTTPLVRNGSTFAANLSDQKEDKKNPPSPQGSAGGNKDEKGIMSYWGIQSSKITKQDGTEWKWNCFRPWETYKADVTIDLTKHHKPTTFLDKMAYWTVKSLRFPTDVFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVAKPRWYERALVITVQGVFFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWQLPPNSTLRDVVMVVRADEAHHRDVNHFASDIHYQGRELREAAAPIGYH 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01101 329 Gene3D Alternative oxidase 78 325 IPR038659 -
Tsu05g01101 329 Pfam Alternative oxidase 118 309 IPR002680 GO:0009916
Tsu05g01101 329 MobiDBLite consensus disorder prediction 51 76 - -
Tsu05g01101 329 PANTHER UBIQUINOL OXIDASE 53 329 - -
Tsu05g01101 329 CDD AOX 146 313 IPR002680 GO:0009916
Tsu05g01101 329 PANTHER ALTERNATIVE OXIDASE 53 329 IPR002680 GO:0009916
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01101 Tsu-Chr5 9635243 9637832 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01101 54 329 Miscellaneous Gene Families AT3G22370 85.507 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01101 K17893 - gmx:547924 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01101 05 9635243 9637832 Tsu05g01101 05 9635243 9637832 ECH