Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01100 ATGTCATCTGATGCAAACAAAATTGGAGATACAAGGGCAGTATATGTTTCTATAtatacagaaagAGATGCAGCATATCCTAGTATTTCTTTTGTGAGTAGTAAGGATAGAGACACTCCCATCACTAGTACTCACAAGGTTCCTTCATATACCCCTACTTTTGAGTGTCTTCTTGAGCAGCAGGTTGTTCAACTTGAGCTGCCTATAGATAACTCCCTCTATGGAACTGGAGAAGTTAGTGGACAACTTGAGAGGACAGGCAAAAGAgttttcACATGGAACACTGATGCAGGGGGTTATGATCCTGGAACTTCATCCTTATACCAATCACATCCGTGGGTGTTAGCTGTTCTTCCAAATGGCGACGCCCTAGGAATTCTCGCTGACACTACAAGGCGCTGTGAGATAGATCTGAGGAAAGAATCAACAATACGTTTCATTGCTCCATCCTCATATCCTGTCATTACATTTGGTCCTTTTGCTTCACCTACGGAAGTTTTGGTATCTCTATCAAAAGCAATTGGAACTGTGTTTATGCCCGCTAAGTGGTCGCTGGGCTATCAACAATGCCGTTGGAGCTATTTATCTGCTCAGAGAGTTCTAGAGGTTGCAAAAACATTTCGGGAAAAGAGCATACCTTGTGATGTGATATGGATGGATATTGATTACATGGATGGTTTTCGTTGTTTTACGTTTGACAAGGAGCGTTTTAGGGATCCCAAGTATTTAGCAAAAGATCTCCATTATAGTGGTTTCAAAGGTATTTGGATGCTTGATCCTGGGATCAAGCAGGAAAAGGGTTATTTTGCATATGACAGTGGTGCTGAAAATGATGTTTGGGTCCAAAAGGCATTCGTCGGGGACGTGTGGCCcggaccttgtgtcttccctgACTATACACAGTCCAAAGTTCGTGCATGGTGGGCAAATTTAGTTAAAGACTTTGTTTCCAATGGTGTTGATGGTATATGGAATGATACGAACGAACCAGCCGTCTTTAAGTCTGTAACAAAAACAATGCCTGAGAGCAATGTTCATAGAGGAGATGGTGAACTTGGAGGTTGTCAGGATCATTCTTTCTATCATAATGTGTATGGTCTGCTGATGGCAAGATCAACTTATGAAGGCATGAAACTGGCTAATGCAAATAAGCGTCCTTTTGTTCTCACGAGAGCTGGATTTATTGGAAGCCAAAGGTATGCTGCAACATGGACCGGAGATAATCTTTCAACCTGGGAGCATCTTCATATGAGTATCTCCATGGTACTTCAGCTGGGACTCAGTGGTCAGCCACTTTCAGGTCCTGATATTGGTGGATTTGCTGGCAATGCAACACCAAGGCTTTTTGGAAGGTGGATGGGTGTAGGTTCCTTGTTTCCCTTTTGCCGAGGGCATTCTGAATATGGAAGCACTGACCATGAACCCTGGTCCTTTGGGGAAGAGTGTGAAGAAGTTTGCCGATTGGCATTGACGAGGCGCTACCGCCTTATTCCCCTTATCTacacacttttttattttgcacaTACGAGGGGCACTCCAGTGGCAACCCCTACTTTCTTTGCTGATCCAAAAGATCTTAGTTTGAGGAAACTTGAAAATTCGTTTTTGCTCGGTCCAATTTTAGTGTATGCAAGCACCACATGCAATCAGGGGTTGGATAAGTTGAAAATCACTCTACCAAAGGGGATATGGTTGGGTTTTGATTTCGGTGATGCACATCCGGATTTGCCTGGTTTATATTTAAAAGGTGGCTCAATTATTCCTGTCGGCCTCCCTCTTCAGCATGTTGGAGAAGCTAATCCATCAGATGATTTGACACTTCTCGTTGCTTTAGATGAATCTGGTAAAGCTGAAGGTTTTCTATTTGAGGATGATGGCGATGGATATGAATTCACTAAAGGCAATTATTTACTAACGCATTATGTCGCTGAACTTCAATCGTCGATTGTTACCCTGAGTGTGCACAAAACTGACGGATCGTGGAAACGACCTAAGCGTCGCCTCCACATTCAAGTATTACTAGGTGGAGGTGCAATGCTTGATACATGGGGAGTGGATGGGGAAGTTCTGCATATAAACTGGCCTTCAGAAGAAGAGGCCTCGAAGCTGGTATCTACTAGTGAGAAGCAATACAAGGAACATTTGGAAAAAGCAATTCAAATTCCTGATGTAGAAGACGAAATTTCTGGACCCAAAGGTATGGAGCTTTCAAGAACTCCCGTTGAACTAAAAAGTAGTGAGTGGCTTCTTAAAGTTGTTCCCTGGATTGGGGGTAGAATCATTTCGATGAGACACTTTCCTTCAGGAACACAGTGGCTCCATGGCAGGATTGAAATCAGTGGATATGAGGAGTACAGTGGTACAGAATATCGTTCTGCTGGGTGTTCTGAAGAATATTCTATAATCAGTCGAGAACTTGAGCATGCTGGAGAGGAGGAATCCGTGGTATTAGAGGGTGATATTGGTGGAGGATTGGTTCTTCAAAGGCATATATATTTTCCAAAGAACGCCACCAACATCATCCAAATAAACTCTAGCATAATAGCACGCAATGTCGGACCTGGTTCAGGAGGGTTCTCAAGGTTGGTCTGCTTAAGAATTCACCCAACATTCCATCTTTTGCACCCATCAGAATCTCTTGTCTCATTTACTTCAATTGATGGGTCGACGCATGAAGTCTTTCCAGATGGTGGGGAGAAAAGCTTTGAAGGACGCCTTATTCCTAATGGTGAATGGAGTCTCGTTGATAAATATCTTGGCTTGGCACTGGTTAATCGATTTAATGTTACCGAGGTATTGAAGTGTCTTATTCACTGGGATTTTGGCACTGTCAACCTGGAGCTTTGGTCGGAAAGCAGACCTGTCTCAGAAAAATCTCCTATTCAGATTTCTCATCAGTACGAGGTTATCCGAATTCGTTAG 2922 0.4233 MSSDANKIGDTRAVYVSIYTERDAAYPSISFVSSKDRDTPITSTHKVPSYTPTFECLLEQQVVQLELPIDNSLYGTGEVSGQLERTGKRVFTWNTDAGGYDPGTSSLYQSHPWVLAVLPNGDALGILADTTRRCEIDLRKESTIRFIAPSSYPVITFGPFASPTEVLVSLSKAIGTVFMPAKWSLGYQQCRWSYLSAQRVLEVAKTFREKSIPCDVIWMDIDYMDGFRCFTFDKERFRDPKYLAKDLHYSGFKGIWMLDPGIKQEKGYFAYDSGAENDVWVQKAFVGDVWPGPCVFPDYTQSKVRAWWANLVKDFVSNGVDGIWNDTNEPAVFKSVTKTMPESNVHRGDGELGGCQDHSFYHNVYGLLMARSTYEGMKLANANKRPFVLTRAGFIGSQRYAATWTGDNLSTWEHLHMSISMVLQLGLSGQPLSGPDIGGFAGNATPRLFGRWMGVGSLFPFCRGHSEYGSTDHEPWSFGEECEEVCRLALTRRYRLIPLIYTLFYFAHTRGTPVATPTFFADPKDLSLRKLENSFLLGPILVYASTTCNQGLDKLKITLPKGIWLGFDFGDAHPDLPGLYLKGGSIIPVGLPLQHVGEANPSDDLTLLVALDESGKAEGFLFEDDGDGYEFTKGNYLLTHYVAELQSSIVTLSVHKTDGSWKRPKRRLHIQVLLGGGAMLDTWGVDGEVLHINWPSEEEASKLVSTSEKQYKEHLEKAIQIPDVEDEISGPKGMELSRTPVELKSSEWLLKVVPWIGGRIISMRHFPSGTQWLHGRIEISGYEEYSGTEYRSAGCSEEYSIISRELEHAGEEESVVLEGDIGGGLVLQRHIYFPKNATNIIQINSSIIARNVGPGSGGFSRLVCLRIHPTFHLLHPSESLVSFTSIDGSTHEVFPDGGEKSFEGRLIPNGEWSLVDKYLGLALVNRFNVTEVLKCLIHWDFGTVNLELWSESRPVSEKSPIQISHQYEVIRIR 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01100 973 PANTHER ALPHA-GLUCOSIDASE 26 970 - -
Tsu05g01100 973 Pfam Galactose mutarotase-like 70 137 IPR025887 -
Tsu05g01100 973 Gene3D Glycosidases 178 495 - -
Tsu05g01100 973 PANTHER BNAA01G23630D PROTEIN 26 970 - -
Tsu05g01100 973 Gene3D - 496 578 IPR013780 -
Tsu05g01100 973 Gene3D - 584 722 IPR013780 -
Tsu05g01100 973 SUPERFAMILY Galactose mutarotase-like 62 143 IPR011013 GO:0003824|GO:0005975|GO:0030246
Tsu05g01100 973 Gene3D glycosyl hydrolase (family 31) 20 158 - -
Tsu05g01100 973 CDD GH31_glucosidase_II_MalA 175 511 - -
Tsu05g01100 973 CDD GH31_N 63 175 - -
Tsu05g01100 973 Pfam Domain of unknown function (DUF5110) 605 673 IPR033403 -
Tsu05g01100 973 Pfam Glycosyl hydrolases family 31 162 587 IPR000322 GO:0004553|GO:0005975
Tsu05g01100 973 SUPERFAMILY (Trans)glycosidases 172 511 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01100 Tsu-Chr5 9623055 9633436 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01100 22 969 Glycoside Hydrolase AT3G23640 71.744 0.0 1455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01100 - - ahf:112747544 1687.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01100 05 9623055 9633436 Tsu05g01100 05 9623055 9633436 ECH