Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01096 ATGGTTGAGAGAAACATGCTTGAGGAACGGCCAATTTCGTTGCGACAAAGTCCTTCGAGAAGGAGATTGTTGAGGCCTGGGGTTGGTACTGATGATAGGGGTTGGACCTCACTTCATGTTTGTGCACGGAAAGGTGATATCAAAGTGGTAAAAAAACTTCTCAATGAAGGAATGGATGTTAATGTGAGTGCATGGGGCCCTAAATCTAAAGGGGTGACCCCTCTCCACCTTGCTGCCGAAGGTGGTCATCTCGGAGTGATGGATGAACTGCTTGAGCGTGGTGCCAATATTGATGCCAGAACTAAGGGAGCCTGTGGCTGGACACCGCTCCACATTGCAGCTAAAGAGAGAAATAGGGATGCTGTGAAATTCTTGGTTGAGAATGGAGCATTCTTGCCACCAGATATGAACGACAGCAGATTTAATCCACCTCTTCATTACTGCCCAGGCCTTGAATGGGCCTATGAGGAAATGAAACGACTTCGGCAGGAAGAATTTTCTCCAGGGGAGACATCTTGCAGCTCAGAAAATTAA 534 0.4738 MVERNMLEERPISLRQSPSRRRLLRPGVGTDDRGWTSLHVCARKGDIKVVKKLLNEGMDVNVSAWGPKSKGVTPLHLAAEGGHLGVMDELLERGANIDARTKGACGWTPLHIAAKERNRDAVKFLVENGAFLPPDMNDSRFNPPLHYCPGLEWAYEEMKRLRQEEFSPGETSCSSEN 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01096 177 PRINTS Ankyrin repeat signature 86 100 IPR002110 GO:0005515
Tsu05g01096 177 PRINTS Ankyrin repeat signature 34 49 IPR002110 GO:0005515
Tsu05g01096 177 Gene3D - 5 166 IPR036770 -
Tsu05g01096 177 PANTHER ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 1-LIKE 11 176 - -
Tsu05g01096 177 Pfam Ankyrin repeats (3 copies) 68 130 IPR002110 GO:0005515
Tsu05g01096 177 ProSiteProfiles Ankyrin repeat region circular profile. 33 62 - -
Tsu05g01096 177 ProSiteProfiles Ankyrin repeat profile. 33 65 IPR002110 GO:0005515
Tsu05g01096 177 ProSiteProfiles Ankyrin repeat profile. 70 102 IPR002110 GO:0005515
Tsu05g01096 177 ProSiteProfiles Ankyrin repeat region circular profile. 105 130 - -
Tsu05g01096 177 SUPERFAMILY Ankyrin repeat 31 148 IPR036770 -
Tsu05g01096 177 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 11 176 - -
Tsu05g01096 177 ProSiteProfiles Ankyrin repeat region circular profile. 70 102 - -
Tsu05g01096 177 Pfam Ankyrin repeat 34 62 IPR002110 GO:0005515
Tsu05g01096 177 ProSiteProfiles Ankyrin repeat profile. 105 130 IPR002110 GO:0005515
Tsu05g01096 177 SMART ANK_2a 105 138 IPR002110 GO:0005515
Tsu05g01096 177 SMART ANK_2a 33 62 IPR002110 GO:0005515
Tsu05g01096 177 SMART ANK_2a 70 99 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01096 31 146 Miscellaneous Gene Families AT5G02620 35.043 5.85e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01096 - - aprc:113868977 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01096 05 9566895 9570095 Tsu05g01096 05 9566895 9570095 ECH