Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01066 ATGCAGGGATCAATTGTTGCAAGGTCAGTTGAAAGTCAACTATCTGGTGGTTCTTTGAGAACTTCTTCTGTTAAGGAAACACTAGAGAATCAACAACCAATACTTAGAATAGATGAATGTGTGTCACCTGCATCTACTGATTCTGTTGTAATTGCAGAAAGGGActcaaaaaatggaaaatacgCAAGTGTAAGCCCCATTGATTCGGTTGATTGCTTGGAGGCTGATCAGCTTATGCAACATATTCATTCTGGGGTGCATGAAAATGACTTCAATTGCACACCTTACGTTCCTGTTTACACAAAACTTCCAGCTGGTATTATTAACAAATTTTGCCAGTTGATGGATCCTGAAGACATTAGGCAGGAGTTAATCCATATTAAGTCTTTAGATATTGATGGTGTTGTTGTGGATTGTTGGTGGGGCATTGTTGAAGGCTGGAGCCCACAGAAATATGTGTGGTCTGGTTATAGGGAGCTTTTTAACATTATTAGAGAATTCAAGCTAAATTTACagGTTGTTATGGCATTTCATGAATGTGGAGGGAATGATTCTAGTGATGCGCTGATTTCCCTCCCACAATGGGTTTTGGATATTGGAAAAGACAACCAGGATATATTTTTCACAGATCGTGAAGGACGGAGAAATACCGAATGCCTATCTTGGGGAATTGACAAAGAGCGGGTTCTCAAAGGAAGAACTGGAATTGAGGTCTATTTTGATATGATGAGAAGCTTTCGGACAGAGTTTGATGACCTGTTTGCAGAAGGCTTGATTGATGCTGTAGAAATTGGACTTGGAGCATCCGGGGAGCTGAAATACCCTTCTTTTTCAGAAAGGATAGGGTGGAGGTATCCTGGTATCGGTGAGTTTCAGTGTTATGATAAATACCTGCAACATAGTCTGCGCAGAGCAGCCAAACTACGTGGTCACTCTTTCTGGGCTAGAGGACCTGACAATGCCGGGCACTACAACTCTATGCCGCATGAGACTGGATTCTTTTGTGAGCGAGGTGATTATGACAACTATTATGGACGCTTCTTCTTACATTGGTACTCCCAGACTTTAATAGACCATGCAGATAATGTTTTGTCTCTTGCAAGCCTTGCTtttgaagaaacaaaaatcattgTCAAGATTCCTGCTGTATACTGGTGGTACAAGACTCCTAGTCATGCAGCAGAGTTGACAGCAGGATATCACAACCCCACAAATCAGGATGGATACTCTCCTGTGTTTGAGGTTCTGAGGAAACATGCTGTCACCATGAAATTTGTCTGCTTAGGATTTAATCTTTCCAGCCAGGATGCTAATGAATCATTAATTGATCCAGAGGGATTGAGTTGGCAGGTATTAAACTCAGCTTGGGACCGGGGATTGTTCGCCGCTGGAGAGAACGCACTATTTTGCTATGATAGAGAAGGGTATAAGAGATTGGTTGAGATGGCAAAACCCAGAAATGATCCTGATCAACGACACTTTTCGTTCTTTGTTTATCAGCAACCATCTTTGCTTCAGGGAAATGTTTGCTTGTCGGAATTGGATTTCTTCATCAAATGCATGCATGGTGAGATGACTGGAGATATGTAA 1590 0.4088 MQGSIVARSVESQLSGGSLRTSSVKETLENQQPILRIDECVSPASTDSVVIAERDSKNGKYASVSPIDSVDCLEADQLMQHIHSGVHENDFNCTPYVPVYTKLPAGIINKFCQLMDPEDIRQELIHIKSLDIDGVVVDCWWGIVEGWSPQKYVWSGYRELFNIIREFKLNLQVVMAFHECGGNDSSDALISLPQWVLDIGKDNQDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDMMRSFRTEFDDLFAEGLIDAVEIGLGASGELKYPSFSERIGWRYPGIGEFQCYDKYLQHSLRRAAKLRGHSFWARGPDNAGHYNSMPHETGFFCERGDYDNYYGRFFLHWYSQTLIDHADNVLSLASLAFEETKIIVKIPAVYWWYKTPSHAAELTAGYHNPTNQDGYSPVFEVLRKHAVTMKFVCLGFNLSSQDANESLIDPEGLSWQVLNSAWDRGLFAAGENALFCYDREGYKRLVEMAKPRNDPDQRHFSFFVYQQPSLLQGNVCLSELDFFIKCMHGEMTGDM 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01066 529 PANTHER - 4 528 IPR001554 GO:0000272|GO:0016161
Tsu05g01066 529 Gene3D Glycosidases 87 528 - -
Tsu05g01066 529 Pfam Glycosyl hydrolase family 14 115 496 IPR001554 GO:0000272|GO:0016161
Tsu05g01066 529 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 131 145 IPR001554 GO:0000272|GO:0016161
Tsu05g01066 529 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 374 390 IPR001554 GO:0000272|GO:0016161
Tsu05g01066 529 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 340 359 IPR001554 GO:0000272|GO:0016161
Tsu05g01066 529 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 409 432 IPR001554 GO:0000272|GO:0016161
Tsu05g01066 529 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 391 402 IPR001554 GO:0000272|GO:0016161
Tsu05g01066 529 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 447 469 IPR001554 GO:0000272|GO:0016161
Tsu05g01066 529 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 152 170 IPR001554 GO:0000272|GO:0016161
Tsu05g01066 529 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 174 195 IPR001554 GO:0000272|GO:0016161
Tsu05g01066 529 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 267 289 IPR001554 GO:0000272|GO:0016161
Tsu05g01066 529 PANTHER BETA-AMYLASE 8 4 528 - -
Tsu05g01066 529 SUPERFAMILY (Trans)glycosidases 91 525 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01066 Tsu-Chr5 9360063 9366064 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01066 7 525 Glycoside Hydrolase AT5G45300 68.522 0.0 750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01066 K01177 - gmx:100777004 1013.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01066 05 9360063 9366064 Tsu05g01066 05 9360063 9366064 ECH