Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01049 ATGTTTAGGATGAGGAAAGGACTCCCTTGTTGCAGCAGGGAAAGAAAAATTAGCATTGATTTTCTTGACCAACAAGAGAGAATTATGACATATAATGGCCTTGAAAGTTGCATTCTAAATAATCAATCatttgaagaagaaagtagAACAAGTAGAGGAGATGGATGCATAACTGATTcatttgatgaagatgattcaaGTTGTTCTTCAAGTAAAGATGCTTTTGGATCATTCTCTTCAAAATGTTTAACAATGAAAAGGGACGATGAACAAGGTCTCGAAGAATGGGAACTCTCGGAAAGTCCTCAAAAAGTTTATGTCAAACAAAAGCCTTCTTATGCTATTCAACATTCGGATATTGAAGACATGAAAGAAAAATTTTCGAAGCTATTACTTGGTGAAGATGTTACTGGTGGAACTAAGGGCATTACTACAGCTTTGGCACTTTCTAACGCCATCACGAATTTATCAGTTACTGTTTTTGGTGAGCTGTGGAAATTGGAACCGTTATCTGAAGAAAGGAAGAGCAAATGGCGAAGAGAAATGGATTGGTTACTGTCTCCTACTAACTATATGGTTGAGCTAGTTCCTGCTAAGCAAAACAATGGCAATGGTGGAATCTTTGAGATAATGACGCCAAAAGCTCGTGCAGACATTCACATGAATCTTCCAGCACTCCAGAAGTTGGACTCTATGCTTATCGAGGCACTTGATTCAATGGTGAAAACCGAGTTTTGGTATGGAGAGGGAGGAAGCCGAACCGAAGGGAAAGACACGAGTGCTCGGCATAGTAAAAGATGGTGGCTTCCATCACCTCAGGTACCGAAAACTGGCCTTTCTGATACCGAAAGAAAGAGGCTTGTTCATCAAGGAAGGGTGGTCCGTCAAGTATTCAAGGCTGCTAAATCTATCAATGaaaatgttttgcttgaaaTGCCTGTGCCAGAAGTTATTAAAGATGCACTTGCAAAGTCTGGAAAGGCAAACCTCGGACAGGAACTGCACAAGGTTTTGACAGCTGAATCAAATTGTGGTGAAGACATGCTTAAATCTCTCAATTTGAAATCCGAGCATATGGCCCTCGAGACTATTAATAAACTGGAAGCTGTTATATTCTCATTGAAAGAGAGAACTATCGAACAAGTCAGCGGAAAATCACCAGTTACAACCTCATGGTCATTTGTGAAGGGCCCTATGTCCGAATTTGATAAAATGGAGTTATTATTGGACCGCACCGAAACACTTTTACAACTGCTTAAAATCAGATACCCTAATCTTCCTCAAACATTTCTTGACGCTGCTAAAGTTCAATATGGCAGGGATATTGGACATTCCATTTTGGAAGCTTATTCAAGAGTTCTTGGAAATTTAGCATTCAGCATATTATCTAGAATAGGAGATATATTACAAGAGGATTGTCTAAGCAATTCTAATTCACTAAGTTGTTCTCCTGGAATAAATCTTTCTGAAACTTGGGTGGTGGATTCACATATTAGGCAATCCTTACTTCAAAAGATGGACAAAGCAGAAGGACAATGTTGTGACAGTACTTCAAATATAGAACTTGAATCTTTTGATGTCAAATCCAAGGAAGTAATAGCTACACCAAGTAGGAGTAATGTTTGGTGCATTAGTAAAGAGGCTTGTACAAGTGTGTCTACTCAAAATTCTCCATAG 1677 0.3787 MFRMRKGLPCCSRERKISIDFLDQQERIMTYNGLESCILNNQSFEEESRTSRGDGCITDSFDEDDSSCSSSKDAFGSFSSKCLTMKRDDEQGLEEWELSESPQKVYVKQKPSYAIQHSDIEDMKEKFSKLLLGEDVTGGTKGITTALALSNAITNLSVTVFGELWKLEPLSEERKSKWRREMDWLLSPTNYMVELVPAKQNNGNGGIFEIMTPKARADIHMNLPALQKLDSMLIEALDSMVKTEFWYGEGGSRTEGKDTSARHSKRWWLPSPQVPKTGLSDTERKRLVHQGRVVRQVFKAAKSINENVLLEMPVPEVIKDALAKSGKANLGQELHKVLTAESNCGEDMLKSLNLKSEHMALETINKLEAVIFSLKERTIEQVSGKSPVTTSWSFVKGPMSEFDKMELLLDRTETLLQLLKIRYPNLPQTFLDAAKVQYGRDIGHSILEAYSRVLGNLAFSILSRIGDILQEDCLSNSNSLSCSPGINLSETWVVDSHIRQSLLQKMDKAEGQCCDSTSNIELESFDVKSKEVIATPSRSNVWCISKEACTSVSTQNSP 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01049 558 ProSiteProfiles PRONE domain profile. 110 482 IPR005512 GO:0005085
Tsu05g01049 558 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 21 549 IPR038937 GO:0005085
Tsu05g01049 558 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 14 21 549 - -
Tsu05g01049 558 Gene3D PRONE domain, subdomain 1 350 482 - -
Tsu05g01049 558 Gene3D PRONE domain, subdomain 1 112 349 - -
Tsu05g01049 558 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 118 476 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01049 Tsu-Chr5 9209542 9216769 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01049 - - gmx:100818685 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01049 05 9209542 9216769 Tsu05g01049 05 9209542 9216769 ECH