Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01020 ATGATGGAAACTCCTCCTAGATGCAAATTTGCATTAATTTTTTCCatcataatttctatttttcttggATTGGTTTCATTCACTTTATGTATAGCCTCAGAAATTAAGAGAAATAAGaaGGAGGATCTTAGATGGAATGGAAAACTATGTTATTTGCCATCAAGTCAAGCATTTGGATTGGGAATTGCAGCTTTGATTAGTTTCATTTGGGCTCAAATTATTGGAAATTCTATATTATTCAAGAATTCTTACTCAAGAAGGAaaataaatgcacaatataagCTACCTTTAATTGCAAGGCTTCTAATTTTCATCTCTTGGCTTGGCTTTGGAGTTACATTTATTTTACTAAATGTAGCAACAAGCATGAGCAGAAGGCAACCCTATGGGGCAGGTTGGTTGAATGGTGAGTGTTACTTAGTCAAAGGAGGGACTTACGCAGGCTCGGCCGTATTGATTCTAGTTACATTAGGATCTGTCGTTGGTTCAATTTTGTTAACGATAAAGACCAATCAAGCAGACCAAGATCACAAAATACACGCGCAAATGGGGTAA 555 0.3423 MMETPPRCKFALIFSIIISIFLGLVSFTLCIASEIKRNKKEDLRWNGKLCYLPSSQAFGLGIAALISFIWAQIIGNSILFKNSYSRRKINAQYKLPLIARLLIFISWLGFGVTFILLNVATSMSRRQPYGAGWLNGECYLVKGGTYAGSAVLILVTLGSVVGSILLTIKTNQADQDHKIHAQMG 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01020 184 Pfam Protein of unknown function (DUF1218) 64 157 IPR009606 -
Tsu05g01020 184 PANTHER PROTEIN MODIFYING WALL LIGNIN-1 6 169 - -
Tsu05g01020 184 PANTHER OS07G0462200 PROTEIN-RELATED 6 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01020 Tsu-Chr5 8849985 8852137 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01020 - - gmx:100500694 239.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01020 05 8849985 8852137 Tsu05g01020 05 8849985 8852137 ECH
Tsu05g01020 05 8849985 8852137 Tsu04g02738 04 31473129 31474619 PCT