Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01013 ATGACCTTTTCAGATGACGAAGACGAAAATCTAGCTCAATTTCTCGAATCAGAAGTCCTCTCTGAGGTCTCTGACAAGGAAGAGGAAAATGTTAAGGAACCTAAAGCAAAGAGAAAACGCATAGAAGAAGCTGAGAGTAATAATCAGGGTATCAAACAGTGTTCTGGCTCATCATCTGAGCCTAAGAACTGTGTTGTTAATAACACCGTTGTGCCGAGAAGGATTGAGACTGGTTTTTTCAGCAAAGTCCCACCAGAGCTTTACCATCATATTCTCAAGTTTCTGTCATCTGAGGACCTTATTTCTTGTTCGTTAGTCTGTAGGTTTCTAAGTTATGCTGCATCTGATGAAGCTTTGTGGCGTCGCCTGTATTGTATGCGATGGGGTGTTCTTCCCCCCTCAAGGAAGATAAGGGACTGCCCGTGGAAAAAGCTATACATTCAGCGTGATGAAAAAGACATGGTTGAACTTGTCAGAAGCTGCCAAAATGAGTTTAAGGAGTACTATATTCAAATGCAAGCAGCTAAGAGAAGTCAAGCACCTCTTCCTTCACAGTTGAAGGATGATAGCATAATTCTTGACAAAACATTAGCTGATCAAGTCTCGTCATGGAAAAGCAGCAGGGGCCTTAGTGATACAGTGGTGACTGACCATGCTTGTTCTGGAAAGACATGCTCATACTACCAAATTGGAGATGTATTTATTTGTGAGAAGACCGGACAAGTTCATGttTGTGATGAAACATGCAAAGAAGTAGTTTTGGATCCCGCCGATGAGCTTTTGGTCTGTACAATATCAGGGCACTGTTTTGATATGTTATTAGCACCATCTGAAATGGAGCCCGACTGTgATCAGCTGCAAGGTGTTGCAGCAGATGAAGAAGAACCATTTATGGGATCTGGCCGTTTTGCACGAGCTTATTTGCTGGGATACAATTGTGCTGATGAAAAGGAGCTTGAAGCTACTTTGAGGTATTGCTGA 981 0.423 MTFSDDEDENLAQFLESEVLSEVSDKEEENVKEPKAKRKRIEEAESNNQGIKQCSGSSSEPKNCVVNNTVVPRRIETGFFSKVPPELYHHILKFLSSEDLISCSLVCRFLSYAASDEALWRRLYCMRWGVLPPSRKIRDCPWKKLYIQRDEKDMVELVRSCQNEFKEYYIQMQAAKRSQAPLPSQLKDDSIILDKTLADQVSSWKSSRGLSDTVVTDHACSGKTCSYYQIGDVFICEKTGQVHVCDETCKEVVLDPADELLVCTISGHCFDMLLAPSEMEPDCDQLQGVAADEEEPFMGSGRFARAYLLGYNCADEKELEATLRYC 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01013 326 SMART fbox_2 83 123 IPR001810 GO:0005515
Tsu05g01013 326 MobiDBLite consensus disorder prediction 21 61 - -
Tsu05g01013 326 Pfam F-box-like 82 125 IPR001810 GO:0005515
Tsu05g01013 326 MobiDBLite consensus disorder prediction 21 46 - -
Tsu05g01013 326 MobiDBLite consensus disorder prediction 47 61 - -
Tsu05g01013 326 ProSiteProfiles F-box domain profile. 77 123 IPR001810 GO:0005515
Tsu05g01013 326 SUPERFAMILY F-box domain 72 149 IPR036047 GO:0005515
Tsu05g01013 326 Gene3D - 65 155 - -
Tsu05g01013 326 PANTHER F-BOX ONLY PROTEIN 3 70 270 - -
Tsu05g01013 326 PANTHER F-BOX ONLY PROTEIN 3 270 326 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01013 - - gmx:100778591 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01013 05 8769618 8773035 Tsu05g01013 05 8769618 8773035 ECH