Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00979 ATGGGGTTTCTAGAGCTATTTTCTGTAGCTTCTTTCCCTGTCATCAAAGTACTAATAGTCACTGCAATTGGCTTACTTCTTGCACTTGATAACATTAATTTATTGGGAAAAGATGCAAGGAATCAAACCAATCATCTTGTACATTATGTGTTTAATCCTGCTTTGATTGGAGGTAGTTTAGCCGAGACAGTCACATTCGAGAATGTTGTTTTATTGTGGTTCATGCCGGTGAATATATTGGTTACATTTTTGTTAGGCTCAGTTTTAGGATGGATCCTTATCAAACTCACAAGGCCTCCAAAAAACATTGAAGGTCTCATAGTAGGTGTTTGTTCTGCAGGAAATTTAGGAAACTTGCCTATAATCATTATCCCAGCAATATGTAAAGACAAAGGTAGTCCTTTTGGAGATCCTGATGTCTGCTATCAATATGGAATGGCTTATGCTTCACTTTCTATGGCAATTGGAGCTATCTTTATATGGACTTATGTGTACAACATAATGAGGATTTCATCAAGTAAAGTTCAGAAAGAAGGTAACAAAAGTAGTGACTCCATCACATTAGAGGCATCAAGGGATGTATTAGAATCATTCACTGAGGAGGAATCAGATACTATAAATGCAGTAAAAGGCAATGTGGATGATTCATACATTCTATTGCCTTCTATGAATGATTCTGAGCAGAAAATGAAGGGGCATATCTTAGATAAAATGAAGTATCAATGTGGAATGATTTTAACCAATCCCAATTTCAGAGGCATATTTTCACCAGCAACTCTTGGAGCAATTGTTGGATTTACTATTGGTGTAGTTCCTAAGTTAAATAGTTTAATGATTGGAAGCAATGCTCCTCTTCATGTGATTGAAGACTCAGCTTCCATGTTGGGTGATGCTGCAGTTCCAACAATAACCCTTATAATGGGTGCCAACCTTCTTAAAGGATTGAAGGGAGCAAGTACTCCATTTTGGACAATTATAGGAATCATAGCAGTGAGATATATTTTGCTACCAATATTTGGTATTCTTATTGTTAATGGAGCAACACAATTGGGTTTGGTGCAAGTAGATCCCTTATATCAGTTTATACTTCTCCTTCAATATGCACTTCCCCCAGCTATGAGTATAGGTACCATAGCACAATTATTTGGAGCTGGTGAAAGTGAATGTTCTATTATCATGCTGTGGACCTATGCATTGGCATCAATTGCGGTTACTCTTTGGTCAACCTACTTCATGTTGCTTGTGGCTTGA 1251 0.3717 MGFLELFSVASFPVIKVLIVTAIGLLLALDNINLLGKDARNQTNHLVHYVFNPALIGGSLAETVTFENVVLLWFMPVNILVTFLLGSVLGWILIKLTRPPKNIEGLIVGVCSAGNLGNLPIIIIPAICKDKGSPFGDPDVCYQYGMAYASLSMAIGAIFIWTYVYNIMRISSSKVQKEGNKSSDSITLEASRDVLESFTEEESDTINAVKGNVDDSYILLPSMNDSEQKMKGHILDKMKYQCGMILTNPNFRGIFSPATLGAIVGFTIGVVPKLNSLMIGSNAPLHVIEDSASMLGDAAVPTITLIMGANLLKGLKGASTPFWTIIGIIAVRYILLPIFGILIVNGATQLGLVQVDPLYQFILLLQYALPPAMSIGTIAQLFGAGESECSIIMLWTYALASIAVTLWSTYFMLLVA 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00979 416 Pfam Membrane transport protein 12 407 IPR004776 GO:0016021|GO:0055085
Tsu05g00979 416 PANTHER AUXIN EFFLUX CARRIER FAMILY PROTEIN 1 416 - -
Tsu05g00979 416 PANTHER - 1 416 IPR045033 GO:0080162
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00979 Tsu-Chr5 8499776 8503388 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00979 K24139 - gmx:100785182 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00979 05 8499776 8503388 Tsu05g00979 05 8499776 8503388 ECH