Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00975 ATGAAATTCAGATTTTGCGCTAATAACAACTGGAGCATTCTCTTCAACAAAGCGCGTAACCTGATCGCTACTCAACGCGCTTCCGCAACAACCGCCGCAACCGTCTCCACCGCCGCCATGACTGacattaaaatccaaaaaacgAAACTCTGCATCATCGGAAGTGGTCCCTCCGCTCACACCGCCGCCGTATACGCCGCCCGTGCCGAACTCAAACCAGTTCTCTTCGAAGGATGGATGGCAAACGACATCGCTCCCGGCGGTCAACTCACAACCACAACCGACGTCGAGAACTTCCCCGGTTTCCCCGACGGCATCCTCGGTGGCGAACTCATGGAACGCTGCCGCCAACAATCGGTTCGTTTCGGTACTGAGATCTTCACTGAGACAGTTTCTAAGGTCGATTTCTCATCTCGTCCTTTTAGGGTTTTTACTGATTCAAGAACCGTTGAGGCTGATTCCGTTATCGTCGCTACCGGAGCTGTTGCGAAACGGTTACCGTTTACTGGCTCTGGGGATGGTCCTGATGGTTTCTGGAACCGAGGGATCTCAGCTTGTGCTGTTTGCGACGGCGCTGCTCCGATCTTTAGAAACAAACCGTTGGCGGTGATCGGAGGTGGTGACTCAGCTATGGAGGAAGCAACGTTCTTAACAAAATACGGTTCAGAAGTTTATATAATTCATCGTAGGGATACATTTAGGGCTTCGAAGATTATGCAGAGTAAAGCTTTGAGTAATAGTAAGATTAAGGTGATATGGAATTCGGCAGTGGTTGAGGCTTATGGAGATGGAGAGAATAAGAAGCTTGGTGGTTTGAAGGTGAAGAATGTGGTGACTGAAGAGGTTTCTGATTTGAAGGTTTCTGGATTGTTTTTTGCAATTGGTCATGAACCTGCAACTAAGTTTTTGGATGGTCAATTAGAACTTGATTCGGATGGATACGTTGTGACGAAGCCTGGGACGACGAAGACTAGTGTTGAGGGAGTTTTTGCTGCTGGGGATGTTCAGGATAAGAAGTATAGACAAGCTATTACTGCTGCTGGCACTGGGTGCATGGCAGCTTTGGATGCAGAACATTTCCTGCAAGAGCTTGGTTTACAACAGGAGAAAACGGATTGA 1119 0.4772 MKFRFCANNNWSILFNKARNLIATQRASATTAATVSTAAMTDIKIQKTKLCIIGSGPSAHTAAVYAARAELKPVLFEGWMANDIAPGGQLTTTTDVENFPGFPDGILGGELMERCRQQSVRFGTEIFTETVSKVDFSSRPFRVFTDSRTVEADSVIVATGAVAKRLPFTGSGDGPDGFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEATFLTKYGSEVYIIHRRDTFRASKIMQSKALSNSKIKVIWNSAVVEAYGDGENKKLGGLKVKNVVTEEVSDLKVSGLFFAIGHEPATKFLDGQLELDSDGYVVTKPGTTKTSVEGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHFLQELGLQQEKTD 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00975 372 SUPERFAMILY FAD/NAD(P)-binding domain 45 360 IPR036188 -
Tsu05g00975 372 Gene3D - 52 360 IPR036188 -
Tsu05g00975 372 Gene3D - 168 299 IPR036188 -
Tsu05g00975 372 PANTHER THIOREDOXIN REDUCTASE 46 368 - -
Tsu05g00975 372 PANTHER THIOREDOXIN REDUCTASE 1-RELATED-RELATED 46 368 - -
Tsu05g00975 372 PRINTS Pyridine nucleotide disulphide reductase class-II signature 153 161 - -
Tsu05g00975 372 PRINTS Pyridine nucleotide disulphide reductase class-II signature 248 264 - -
Tsu05g00975 372 PRINTS Pyridine nucleotide disulphide reductase class-II signature 289 310 - -
Tsu05g00975 372 PRINTS Pyridine nucleotide disulphide reductase class-II signature 324 342 - -
Tsu05g00975 372 PRINTS Pyridine nucleotide disulphide reductase class-II signature 87 102 - -
Tsu05g00975 372 PRINTS Pyridine nucleotide disulphide reductase class-II signature 179 191 - -
Tsu05g00975 372 PRINTS Pyridine nucleotide disulphide reductase class-II signature 196 220 - -
Tsu05g00975 372 PRINTS Pyridine nucleotide disulphide reductase class-II signature 108 118 - -
Tsu05g00975 372 PRINTS Pyridine nucleotide disulphide reductase class-II signature 49 71 - -
Tsu05g00975 372 Pfam Pyridine nucleotide-disulphide oxidoreductase 49 349 IPR023753 GO:0016491
Tsu05g00975 372 PRINTS FAD-dependent pyridine nucleotide reductase signature 50 69 - -
Tsu05g00975 372 PRINTS FAD-dependent pyridine nucleotide reductase signature 314 336 - -
Tsu05g00975 372 PRINTS FAD-dependent pyridine nucleotide reductase signature 152 170 - -
Tsu05g00975 372 PRINTS FAD-dependent pyridine nucleotide reductase signature 200 218 - -
Tsu05g00975 372 PRINTS FAD-dependent pyridine nucleotide reductase signature 287 303 - -
Tsu05g00975 372 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-II active site. 186 208 IPR008255 GO:0016491
Tsu05g00975 372 TIGRFAM TRX_reduct: thioredoxin-disulfide reductase 49 361 IPR005982 GO:0004791|GO:0005737|GO:0019430
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00975 Tsu-Chr5 8462271 8467829 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00975 K00384 - gmx:100790557 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00975 05 8462271 8467829 Tsu05g00975 05 8462271 8467829 ECH