Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00971 ATGAGCATGGCCATTACCCTTACAAAAGATTGGAAACCTATATGTGACATAAAGTGCCATGACCCACCGGCTGAATTgtcACAAGACTTGAACATAGATTCAATTGTTTCGAAGAGAAAGCTAACCAATCTTTCTGCATTGGCCCAGTTTTCAGTAGCACCTGCTCCAAACTCTTCACGTGACAGGAATGAGTGGGGAAAGTTTTTGACTTTCTTGCGCAAACATGACATGGTTGCTATTACAACCTTCCAGCAGTACAAGTTTTACTTTTTGCCTCCTAAAGCATCTATATCAAGCGATTTAAGCCCAGTTAATGTTGCATATCAAATAGACAGCACATGTACTGTAGATGCTCGTCCAAGAGATTGTGAATCAGAGGCTTCCTTAACAGGTTCACACTTAGTTGAGGAACATGGTGGACACAATACTGTCACAGCAAGAGGTCCATCAAATTGTGGAGATGTCTCTTCACGTCCTAAGTTTCCTCCCAGGGAGGATCGTGCATATCGTTTTACATCCGAGACTTGTGGCGGAATTCAGTCACATGTGACGCAGGAAAGACTGCCCGAGAAAAATTTCATACGAGCAGATCCAAGTTACCTGAAAACTCTTGGCCAGGCTCACTCTGGATGGATTTTTGGTGGAATAGCTGAGCTTGTTGATAATTCAAGGGATGCCAAAGCAACAAAGATCAATATTTTAGTTGATGTGATAAAGTTGCAGAAATCTGGGAAGGATGTACCCATGCTATCAGTAATTGATGATGGTCACGGGATGAACCATGAAGAGGTTGTGAAGATGGTATCTTTTGGGCACAAACAATCTGATTATGACGACAAGGATCAAATTGGTAGATTTGGTGTTGGATTCAAGACAGGAGCAATGAGGCTTGGCAGAGATGTTCTTGTTCTAACCCAGACTGCTAATTCTAGATCCATAGCTTTTCTTTCACAATCACTGAATGAAGGCAAGGATaATATAGAGATACCCATAGTTAGTTACTGCCGACAAGGACAACAAATGGAAGTTGACACAAAAGCTCAGTCTGAAACATTGGCAAAGTACAATTTGAAAGCTATTAAGGAGTTCTCACCATTTAATAAATATCTTATTGGTGAAAAGGCAGCCTTGTTTGGTGGTGGTACGGgaacccaaatatatatatggaacTTGGATGAATGGGGTTCAGAGTGTTGCCTAGAGTGGCATAACGGACTGGAAGGTGGGAGTTCTTTTCACCAAGGTGACATTTTCATCCGCAGCAAAAGGAGTCGTTCTCGGCTAGGCCAACTTAATCAAAAGGTTTGGTATCTCTTTTGCTTTTATGAGATGATTTTGAAACTATACCTGATTTTTTCATGTTTCTTGTTGCTTCAGGTTCCTTTGGATTACTCATTACGGGCTTATTTGGAAGTCATCTTCTTAGTTCCACGAATGAAGATATGTGTTCAAGGGAAACTGGTTAAAAGTCGACCGCTAGCAAATTTCCTCACTAATACTGTTATCGTAACTGGTGACATCATGGGAAGGGCAGTTGAATTGACTCTAGGATTTAGTCAATTAGAATGGGAACAAGCAAGCTGTGGAGTATTTTTGTATTGGCATGGTCGCTTAATTGAGGCTTACAAGAGAGTTGGTGGTATGATTCATAGTGCAGATGTAGGTCGGGGTGTAATTGGTGTCATGGATGTGACCAATTTAATGGATGATCAGAATGGTCGTGTGTGGGTGCATAATAACAAGCAAGGATTTCAAGACTGTGAAGCATATGCATGTCTTGAGCAGTGGCTTGGGAAAAAAGCAGATGAGTACTGGGACAATAATTTTGATTCACTTAATTTGGACACAGATAATTGTGTCTACAAACCAGATCGTGACTGGGTGCAATGTGACAAATGCAGAAAGTGGAGAATGTTACCTCCCGCCTTTGACAGCCGAGAATTGCCTGGACAATGGTTCTGTTTTATGGAGCCTTGCAAAGGTCAATGTGCAGATCCTGAACAGAAGCTGAAGCCTGGCATAGTCACTATTTCCACAAAGCGATCAGGATATGATCACACGCTGAAGGATTCTCCCAATATCAAGATTGAATCTGGTACGGATGCTTCTCGCACAGATAACAAAATCGTCAATTCTGAGGAGGTAAAATCAGCCTTGAAGCGGTTGAAAAGGGGACTTCCAAATCCCAAATCTCCTTCCTTAACCAAACAGAAAAAGAGATAA 2223 0.4116 MSMAITLTKDWKPICDIKCHDPPAELSQDLNIDSIVSKRKLTNLSALAQFSVAPAPNSSRDRNEWGKFLTFLRKHDMVAITTFQQYKFYFLPPKASISSDLSPVNVAYQIDSTCTVDARPRDCESEASLTGSHLVEEHGGHNTVTARGPSNCGDVSSRPKFPPREDRAYRFTSETCGGIQSHVTQERLPEKNFIRADPSYLKTLGQAHSGWIFGGIAELVDNSRDAKATKINILVDVIKLQKSGKDVPMLSVIDDGHGMNHEEVVKMVSFGHKQSDYDDKDQIGRFGVGFKTGAMRLGRDVLVLTQTANSRSIAFLSQSLNEGKDNIEIPIVSYCRQGQQMEVDTKAQSETLAKYNLKAIKEFSPFNKYLIGEKAALFGGGTGTQIYIWNLDEWGSECCLEWHNGLEGGSSFHQGDIFIRSKRSRSRLGQLNQKVWYLFCFYEMILKLYLIFSCFLLLQVPLDYSLRAYLEVIFLVPRMKICVQGKLVKSRPLANFLTNTVIVTGDIMGRAVELTLGFSQLEWEQASCGVFLYWHGRLIEAYKRVGGMIHSADVGRGVIGVMDVTNLMDDQNGRVWVHNNKQGFQDCEAYACLEQWLGKKADEYWDNNFDSLNLDTDNCVYKPDRDWVQCDKCRKWRMLPPAFDSRELPGQWFCFMEPCKGQCADPEQKLKPGIVTISTKRSGYDHTLKDSPNIKIESGTDASRTDNKIVNSEEVKSALKRLKRGLPNPKSPSLTKQKKR 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00971 740 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 3 436 IPR045261 GO:0016887
Tsu05g00971 740 Gene3D - 615 671 - -
Tsu05g00971 740 MobiDBLite consensus disorder prediction 686 740 - -
Tsu05g00971 740 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 216 336 - -
Tsu05g00971 740 MobiDBLite consensus disorder prediction 140 164 - -
Tsu05g00971 740 Pfam CW-type Zinc Finger 627 668 IPR011124 GO:0008270
Tsu05g00971 740 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 204 371 IPR036890 -
Tsu05g00971 740 Gene3D - 185 373 IPR036890 -
Tsu05g00971 740 PANTHER OS06G0622000 PROTEIN 459 727 - -
Tsu05g00971 740 Pfam Morc6 ribosomal protein S5 domain 2-like 464 605 IPR041006 -
Tsu05g00971 740 PANTHER OS06G0622000 PROTEIN 3 436 - -
Tsu05g00971 740 MobiDBLite consensus disorder prediction 707 721 - -
Tsu05g00971 740 ProSiteProfiles Zinc finger CW-type profile. 621 671 IPR011124 GO:0008270
Tsu05g00971 740 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 459 727 IPR045261 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00971 Tsu-Chr5 8421944 8431150 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00971 - - cam:101494973 1042.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00971 05 8421944 8431150 Tsu05g00971 05 8421944 8431150 ECH