Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00868 ATGAACAAACTTTGGGTGCGGATGCAACATCAGGGGCCGTCCCGGGAGAAGGAGAAACGGGAAAAGGAAAGGAGTGAGCTGCGAGATCTTGTTGGGAAGAATCTTCATGTTCTCAGTCAGATAGAGGGTGTTGACCTTGATATGTACAAAGATGTTGTGCTACCTAGAGTACTGGAGCagGTTGTGAATTGCAAAGATGAGTTGGCCCAATTCTACTTGATGGATTGCATAATTCAAGTCTTCCCGGATGAGTATCACTTGCAAACTCTTGATGTGTTGTTGGGTGCTTACCCTCAACTTCAGCCATCAGTTGACATCAAGACAGTACTATCCCAGTTAATGGAAAGACTTTCAAATTATGCTGCTTCAAGTGCTGAGGTGTTGCCTGAGTTTTTGCAGGTGGAAGCATTTTCCAAATTAAGCAACGCAATCGGCAAGGTGATAGAGGCACAGCCTGACATGGCCACTGCTGGAGTTGTAACTTTATATTCATCTCTGCTTACCTTCACTCTTCATGTCCACCCCGATCGACTAGATTATGCTGATCAAGTCTTGGGagcatgtgttaaaaatctctCTGGCAAAGGTAAAATTGAGGACAAGAAGGCAACGAAGCAGATTGTTGCTTTATTAAGTGCTCCACTAGAGAAATACAATGACATTATGACTGCCTTGAAGCTTTCAAACTATCCTCATGTAATGGAATTCCTTGACATTCCAACTAATAAGGTCATGGCAACTGTTATTATTCAAAGCATTATGAAAAATGCAACACGCATTTCTACTTCAGACAAGGTTGAAGCATTGTTTGAACTGATAAAAGGGCTTATCAAGGATTCAGATGCGACTCCTAATGATGAGCTGGATGAGGATGATTTCAAAGAGGAGCAGAATTCTGTTGCACGTCTGATCCAGATGCTTTATAATGAGGATCCAGAAGAGATGTTTAAGATCATTGAAACTGTGAGGAAGCACATACTGACTGGAGGACCAAAGCGTCTGCCTTTCACTGTTCCACCTCTTATGTTTTCTTCTTTAAAGTTGGTCAGACAGTTGCAAGGTCAAGGTCAAGAAGAAAATCCTTTTGGGGATGATTCGGCAACATCACCAAAGAAAATCTTTCAGCTTTTAAATCAGACCATCGAGACTCTGTCAGGTGTCCTGGCACCAGAGTTAGCATTGCAGTTGTGCTTGCAATGTGCTGAGGCTGCAAATGACTGCGAGTTGGAACCAGTTGCATATGAATTTTTTACGCAAGCTTATATTCTATATGAAGAAGAAATTTCCGATTCCAGAGCACAGGTCACAGCTATCCATTTAATAATAGGAACTCTTCAAAGGATGCATGTCTTTGGCGTTGAGAACAGGGATACGTTAACTCACAAGGCCACTGGGTATTCAGCGAAGCTTTTAAAGAAGCCAGATCAATGCAGAGCTGTGTATGCGTGCTCACATTTGTTTTGGGTTGATGATCATGATAACATGAAAGATGGAGAGAGAGTCCTATTATGCCTTAAGCGAGCTTTAAGGATTGCAAATGCTGCGCAACAAATGGCAAATGCTGCACGGGGTAGCACCGGATCAGTAATGCTTTTCATTGAGATTTTGAACAAGTATCTTTACTTTTTTGAGAAGGGGAACCCACAAGTGACAGTTGCTGCTATCCAGGGCCTAATTGAGttaattatgaatgaaatgcaaAGTGACACTGCAACTCCAGATCCATCTGCAGATGCTTTCTTAGCCACTACTATGCGCTATATACAGTTCCAAAAACAAAAGGGTGGTACAGTTGGTGAGAAATATGAACCAATCAAGGTTTGA 1824 0.4145 MNKLWVRMQHQGPSREKEKREKERSELRDLVGKNLHVLSQIEGVDLDMYKDVVLPRVLEQVVNCKDELAQFYLMDCIIQVFPDEYHLQTLDVLLGAYPQLQPSVDIKTVLSQLMERLSNYAASSAEVLPEFLQVEAFSKLSNAIGKVIEAQPDMATAGVVTLYSSLLTFTLHVHPDRLDYADQVLGACVKNLSGKGKIEDKKATKQIVALLSAPLEKYNDIMTALKLSNYPHVMEFLDIPTNKVMATVIIQSIMKNATRISTSDKVEALFELIKGLIKDSDATPNDELDEDDFKEEQNSVARLIQMLYNEDPEEMFKIIETVRKHILTGGPKRLPFTVPPLMFSSLKLVRQLQGQGQEENPFGDDSATSPKKIFQLLNQTIETLSGVLAPELALQLCLQCAEAANDCELEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDHDNMKDGERVLLCLKRALRIANAAQQMANAARGSTGSVMLFIEILNKYLYFFEKGNPQVTVAAIQGLIELIMNEMQSDTATPDPSADAFLATTMRYIQFQKQKGGTVGEKYEPIKV 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00868 607 Pfam Vacuolar protein sorting-associated protein 35 1 564 IPR005378 GO:0015031|GO:0030906|GO:0042147
Tsu05g00868 607 Gene3D - 280 592 IPR042491 -
Tsu05g00868 607 PANTHER VACUOLAR SORTING PROTEIN 35 1 607 IPR005378 GO:0015031|GO:0030906|GO:0042147
Tsu05g00868 607 SUPERFAMILY ARM repeat 41 569 IPR016024 -
Tsu05g00868 607 MobiDBLite consensus disorder prediction 1 23 - -
Tsu05g00868 607 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 35A 1 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00868 Tsu-Chr5 7501155 7509961 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00868 K18468 - gmx:100809289 1092.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00868 05 7501155 7509961 Tsu05g00868 05 7501155 7509961 ECH