Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00863 ATGGGTTGTTGTTATTCAAGAGTAGAAAGGGAAGAAACAGTGTCACATTGCAAATCAAGAAAACGTTACATGAAACAATTGGTTGAAGCAAGACATGCTTTTTCAGCTGCTCATGTTATGTACATTCGATCTCTTCGTTCAACTGGTTCTGCTTTGTTTCACTTTGCAAACGCTGAAAAAACCACTCATTTTAACCACCATCTTATTCCTGAGCCAAAACCCATTCTTCCACCACCGCCGCCGCGTGCTCCGTCGCCAATgccgccaccaccaccacctccgaTGAGTCCTAGTTTAAGTTCTTATACTTGGACTTCTGGGACAGGTTCATCTCCTCTTCCTCCGCCTCCTCCGCCGCCACCTCCGCCGCCGGTGATGTCCTCCGGTTGGGATTTCTGGGATCCTTTCATGCAGCAACCACCTCCTCCTCCTTCGTCGAGGTCGGCGACTGAGGAAGAGTGGGAAGCTACTACTACTACTGGCTCTGAGATGGTTGTGAATGTGATGACTGGTGGTACGGCGGCGAGTATGGCTACTCCGGCTTCTGGGGTGGTGGGGTATTCTAAGGAAACATCAAGTGAACTTGCAATGGTGGTTTCTAGAAATAGTAAAGATCTGGTTGAAGTTATCAAAGAGCTTGATGATTACTTTCTTAAAGCTGCTGATGCTGGTTCTCATGTTTCATTTCTGTTACAAGTTCCAAGTTCTGGTTTTTCTGATCATAGTAAAGCAAGTAAAATGTACGGAAATGGATGGAGTTTGAGTCCTTCAATGTGGGCTTGGGGTTCTTCAAGTCCTAAAGTGAATGGATTTGGGAAACTGACTCAGGAGGTTTCTGTTGGTAGTTTTAGGGCTAATGGTGTTGGAAATGGTGGACATTGCTCTACTTTGGAGAGACTATATGCATGGGAGAAGAAATTGTACCAAGAAGTCAAGAATGCTAAAATAATAAAGATGGAGCATGAGAAGAAAATGGCAATGGTAAGGAAGTTGGAGATGAGAAGTGCTGACTATTTGAAGACAGAAAAAGCAAAGAAAGAAGTGGAGAAATTAGAATCACAAATGATGGTTTCTTCCCAAGCCATAGATAGTACATCTGCTGAAATCATCAAATTAAGGGAGATAGAGCTCTACCCTCAACTCATTGAGCTTGTCAAAGGGTTGATGTGCATGTGGAGAAGCATGTATGAGTGTCATCAAGTCCAGAAACACATAGTTCAACAACTTGAATATCTCAATACCATACCATCGAACAACCCTACATCTGAAATTCATAGACAATCAACACTTCAGCTGGAGCTCGAAGTACAGCAATGGCACCAATCCTTTTGCAACCTCTTCAAAGCTCACCGTGATTATATTGAATCGCTCACAGGTTGGTTAAGGCTCAGTCTTTACCAGTTTAGCCGAAACCCTCTTAGCAGAACTGCTGAAGAGTCAAAGATGTACACCCTCTGCGAACAATGGCACCTTGCTGTCGAGCATATACCTGACAAGGTAGCGTCCGAAGGAATAAAAAGTCTGTTGACAGTTATTCATGCGATTGTAGTTCAACAGATGGAGGAGCATAAACAAAAGAAGAAGTCGGATTATGCGTTCAAAGAGTTTGAGAAGAAGGTGGTTCAGCTTAGATCCTTGGAGTGCAAGTATGGTCCGTACTCCATGACGGAACAGTCTGGTTCGATGAGAAGAATGAAGGACCCTGTCGTTGAGAAGCGGGCTAAGGTGGAAGCTTTGAGAGCGAAGGCTGAAGAAGAGAAGACGAAACATGAAAAGGCAGTGAGTGTTACGAGGGCAATGACATTAAATAACTTGCAAATGGGTTGTCCTCAAGTTTTTCAAGGGATTGTAGGGTTTTCAAGTGTGTGCACGGAGGCTTTTGAGTCTGTATACAACAAAGCTAAAGTTGCTGAACAGGAGCGCGACGTTAAGAGAATATTACCGTAG 1947 0.4319 MGCCYSRVEREETVSHCKSRKRYMKQLVEARHAFSAAHVMYIRSLRSTGSALFHFANAEKTTHFNHHLIPEPKPILPPPPPRAPSPMPPPPPPPMSPSLSSYTWTSGTGSSPLPPPPPPPPPPPVMSSGWDFWDPFMQQPPPPPSSRSATEEEWEATTTTGSEMVVNVMTGGTAASMATPASGVVGYSKETSSELAMVVSRNSKDLVEVIKELDDYFLKAADAGSHVSFLLQVPSSGFSDHSKASKMYGNGWSLSPSMWAWGSSSPKVNGFGKLTQEVSVGSFRANGVGNGGHCSTLERLYAWEKKLYQEVKNAKIIKMEHEKKMAMVRKLEMRSADYLKTEKAKKEVEKLESQMMVSSQAIDSTSAEIIKLREIELYPQLIELVKGLMCMWRSMYECHQVQKHIVQQLEYLNTIPSNNPTSEIHRQSTLQLELEVQQWHQSFCNLFKAHRDYIESLTGWLRLSLYQFSRNPLSRTAEESKMYTLCEQWHLAVEHIPDKVASEGIKSLLTVIHAIVVQQMEEHKQKKKSDYAFKEFEKKVVQLRSLECKYGPYSMTEQSGSMRRMKDPVVEKRAKVEALRAKAEEEKTKHEKAVSVTRAMTLNNLQMGCPQVFQGIVGFSSVCTEAFESVYNKAKVAEQERDVKRILP 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00863 648 PANTHER SERINE HYDROXYMETHYLTRANSFERASE, PUTATIVE (DUF632)-RELATED 1 633 - -
Tsu05g00863 648 SUPERFAMILY Formin homology 2 domain (FH2 domain) 114 124 - -
Tsu05g00863 648 Coils Coil 341 361 - -
Tsu05g00863 648 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Tsu05g00863 648 MobiDBLite consensus disorder prediction 68 159 - -
Tsu05g00863 648 Pfam Protein of unknown function (DUF632) 206 513 IPR006867 -
Tsu05g00863 648 MobiDBLite consensus disorder prediction 110 128 - -
Tsu05g00863 648 PANTHER UNCHARACTERIZED 1 633 - -
Tsu05g00863 648 Coils Coil 569 593 - -
Tsu05g00863 648 MobiDBLite consensus disorder prediction 71 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00863 Tsu-Chr5 7471166 7476020 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00863 1 59 Acyl Lipid Metabolism Gene Families AT2G27090 38.983 4.77e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00863 - - aprc:113869576 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00863 05 7471166 7476020 Tsu05g00863 05 7471166 7476020 ECH