LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu05g00850	atggcTGCTGCTGTAACAGCCGCCGTCTCTTTTCCATACTCCAACACCACTTCTCTCCCGATCAGGACATCTGTTATTGCCCCAGAGAGACTTGTCTTTAAGAAGGTTTCATTGAATAATGTTTCTATAAGTGGAAGGGTAGGTACCATCAGAGCACAAGTTACTACAGAAGCTGAAGCACCTGCCAAGGTAGTAAAGATATCAAAGAAACAGGATGAAGATATTGTTGTGAACAAGTTCAAACCCAAGGAACCATACACTGGAAGGTGTCTTCTTAACACAAAGATCACTGGTGATGATGCACCTGGTGAAACTTGGCACATGGTTTTCAGCACTGAGGGAGAGGTTCCTTACAGAGAAGGACAATCCATTGGGGTGATTCCAGATGGTATTGATAAGAATGGCAAGCCTCACAAGCTAAGATTGTATTCAATTGCTAGCAGTGCCCTTGGTGATTTTGGAGACTCCAAAACTGTTTCTCTATGCGTGAAACGTCTTGTGTACACAAATGATGCTGGAGAAGTTGTTAAGGGAGTCTGCTCAAATTTCTTGTGCGATTTGAAGCCTGGAAATGAAGTAAAGATTACTGGACCAGTTGGTAAAGAAATGCTTATGCCAAAAGATCCTAATGCCACCGTCATCATGTTGGGAACTGGTACTGGAATTGCCCCATTCCGCtcatttttatggaaaatgttcTTCGAGAAGCATGAAGATTACAAGTTCAATGGTTTGGCATGGCTCTTCCTTGGTGTCCCCACTAGCAGCTCACTGCTTTATAAGGAGGAATTTGAAAAGATGAAGGAGAAAGCACCTGAAAACTTCAGGCTTGACTTTGCTGTGAGCAGAGAGCAAGTAAACGATAAAGGCGAGAAAATGTACATCCAAACCAGAATGGCTCAATATGCAGAAGAGTTGTGGGAATTACTTAAGAAAGACAATACTTTTGTTTACATGTGTGGACTGAAAGGAATGGAGAAGGGAATTGATGACATCATGGTGTCACTCGCAGCCAAAGACGGTATCGATTGGGTCGAGTACAAGAGACAGTTGAAGAAGGCGGAGCAATGGAACGTTGAagtttattga	1089	0.4187	MAAAVTAAVSFPYSNTTSLPIRTSVIAPERLVFKKVSLNNVSISGRVGTIRAQVTTEAEAPAKVVKISKKQDEDIVVNKFKPKEPYTGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGVIPDGIDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGNEVKITGPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDGIDWVEYKRQLKKAEQWNVEVY	362

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu05g00850	362	PIRSF	Frd-NADP+_RD	1	362	IPR015701	GO:0016491
	Tsu05g00850	362	PANTHER	FERREDOXIN--NADP REDUCTASE, LEAF ISOZYME 1, CHLOROPLASTIC	1	362	-	-
	Tsu05g00850	362	SUPERFAMILY	Ferredoxin reductase-like, C-terminal NADP-linked domain	208	362	IPR039261	-
	Tsu05g00850	362	CDD	CYPOR_like_FNR	78	362	-	-
	Tsu05g00850	362	SUPERFAMILY	Riboflavin synthase domain-like	60	206	IPR017938	-
	Tsu05g00850	362	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	118	128	IPR001709	GO:0016491
	Tsu05g00850	362	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	141	148	IPR001709	GO:0016491
	Tsu05g00850	362	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	178	187	IPR001709	GO:0016491
	Tsu05g00850	362	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	214	233	IPR001709	GO:0016491
	Tsu05g00850	362	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	244	253	IPR001709	GO:0016491
	Tsu05g00850	362	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	256	267	IPR001709	GO:0016491
	Tsu05g00850	362	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	292	308	IPR001709	GO:0016491
	Tsu05g00850	362	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	316	324	IPR001709	GO:0016491
	Tsu05g00850	362	PIRSF	FNR-PetH	2	362	IPR035442	GO:0016491
	Tsu05g00850	362	ProSiteProfiles	Ferredoxin reductase-type FAD binding domain profile.	83	205	IPR017927	GO:0016491
	Tsu05g00850	362	Gene3D	-	200	362	IPR039261	-
	Tsu05g00850	362	Pfam	Oxidoreductase NAD-binding domain	215	329	IPR001433	GO:0016491
	Tsu05g00850	362	Gene3D	Translation factors	53	199	-	-
	Tsu05g00850	362	PANTHER	-	1	362	IPR015701	GO:0016491

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu05g00850	Tsu-Chr5	7380274	7384523	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu05g00850	K02641		-	gmx:100798467	660.988

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tsu05g00850	05	7380274	7384523	Tsu05g00850	05	7380274	7384523	ECH