Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00825 ATGGACCGTCGAGGTTGGCCGTGGAAGAAAAAATCATCCGATAAAATCACAAAGGCAGATATACCATTTGTTACACCTGACTCTGTTGGTTCCACTTTATCTTCTGTGGCACATTTAGGGAATCagCAGGACAACTGCACAAATAAGAACTATGTTCAAATTTCAATGGAGTCATACACGCGTATGTCTGGATTGGAAGATCAAGTTGTGCACCTGGAGGATCAAGTAAAAGATTTGGAATCAAAGCTATCATCAGCTTATTCAGAGTTAGATAACAAGGAAAATCTGGTTAAACAACACGCAAAAGTTGCCGAGGAAGCAGTCTCAGGTTGGGAGAAAGCTGAAGCAGAAGTAGTTTCCTTAAGATGTCAACTTGAATCGATCACCCTCTCAAAGCGTAGTGTTGATGAGAGAGCAACTCACTTAGATGGAGCTCTGAAAGAATGCATGAAGCAGATAAGAACTGTAAAGGAGGAAAGTGAGCAGAAAATACATGAAGTGATTCTAATGAAATCTCAACAGTGGGAGAAATTCAAGTTAGAGCTTGAAGCAGAAATAGATAAATTGGATAAAGGACTTCGTGAAGAAGCTCGTGAAAATGCTGCACTTCTGAGATCACTACATGAAagttcaaataaaatagtgaaaCTAAAAGAAGAAAAGTCCGAAGTTGAGTCCGAGTTAGAGCTTCAAAAGAAGAATGTTCAGTcatatgaaaaagaaataaattcaTTGAAGTATGAGCTGCATATGATTTCTAAGGAGATGGATATCCGCAATGAAGAGAAGGACATGATTATGAAATCAGCAGAAGTGGCAAACAAACAACGCGCTGAGGATGTTAGGATCATTACCAATCTAGAGGGTGAGTGCCAACGGCTTCGCGGTCTTTTGCGAAAAAAGTTACCTGGACCTGCTGCATTGGCACAAATGAAGCTAGAAGTTGAAAGTACACGCCACGTCATTAGTGGAATCCATCAAAGAAAAACTAGTAGCTTGCAAGAATCCGAGTTTCTTAATATGTCGAAACAATTGGAGTTGtttgaagaagaaacaaagagaTTGAAAGAAGCTTTGGCCTCAAGTAAAGCTGAACTGCAGGCTTCTAGGAACTTGAACACTACAACAGTTGACAGACTTAAGAGCTTAGAAGCCGAGGTACAAGTTCTTTATCAAGAAAGAAGTTCGCAGAAATCAAATTTGGCGATCAATTACCAAAATTCTTCAAGCAGAATTTGTAGCAATTCACCAAGCATCACTTCCATATCTGATAGTTGGCATGAGGATCCGGAAAGTCCTGTTGAGTCATCTGCAGATTCAATTTCTGATCATTTTGATATAAGGAGAGTTAGAAGCTCAGTTAAATTTGAGAGCCACAAAAGTGAAACTATCTCAGAACTGATGGATGATTTCCTCGAAGTGGAGAAAATGGCATCTTCATCACACAATGACAGTGTACAGATTGTTGACAAAGTTAAGAACGACTCTGAAGATAAACAATTGAAATCAAATGATGCTTTGGTTGAGATTCAGCTGAAATGTATGACAGAGTCTTATAAGTCACTTCAAACACATGTAGAAGAGTTAGAAGCTGAAAATAAGTTTCTTAAGGAAAAGATAGATGAGCTGAAGAATGATCTTGAGGAGGAAAAACAATGCCATCATGATGCTTTGGTTAGATataaagaaattgaagaaaaaatgcCAAGGGACAAGTGCCTGTTGTGCGCATCGAATTCGGAAGCAAATAATGACATCAATACTCGGAAGGATACAGAACTAGCAGCTGCAGAGAAAAAGCTAGCAGAATGTCAAGAGACTCTGCATGTACTTGGCAGGCAATTACAAGCAATGAGCCCACAAATTGGTTCTAAAAGACTTCAAACAAATGAATCATCGGTTAAACCGAATTATGGCTGGTCAAATTCTAATGGCTCCTATAATAACTCGGACGAAATTGATCATGCTGAAGCATACAGTGTATCTTCTAATTCTGACATTCAAGGAGTGAATGATGAGTTTTCATCATCTCACAACTTTGGTTCCATGTCATGTCTTTCAGACGCCGAATGCAACATTTCAATAAATTCTTCAACTGAGTCGAGCCAGAGTTGTTATATGCTAACTGAATCACATTCACGTTCTTCCGGTTCTGCTACAGGGAAGCAACATGCACATGGTTAG 2184 0.38 MDRRGWPWKKKSSDKITKADIPFVTPDSVGSTLSSVAHLGNQQDNCTNKNYVQISMESYTRMSGLEDQVVHLEDQVKDLESKLSSAYSELDNKENLVKQHAKVAEEAVSGWEKAEAEVVSLRCQLESITLSKRSVDERATHLDGALKECMKQIRTVKEESEQKIHEVILMKSQQWEKFKLELEAEIDKLDKGLREEARENAALLRSLHESSNKIVKLKEEKSEVESELELQKKNVQSYEKEINSLKYELHMISKEMDIRNEEKDMIMKSAEVANKQRAEDVRIITNLEGECQRLRGLLRKKLPGPAALAQMKLEVESTRHVISGIHQRKTSSLQESEFLNMSKQLELFEEETKRLKEALASSKAELQASRNLNTTTVDRLKSLEAEVQVLYQERSSQKSNLAINYQNSSSRICSNSPSITSISDSWHEDPESPVESSADSISDHFDIRRVRSSVKFESHKSETISELMDDFLEVEKMASSSHNDSVQIVDKVKNDSEDKQLKSNDALVEIQLKCMTESYKSLQTHVEELEAENKFLKEKIDELKNDLEEEKQCHHDALVRYKEIEEKMPRDKCLLCASNSEANNDINTRKDTELAAAEKKLAECQETLHVLGRQLQAMSPQIGSKRLQTNESSVKPNYGWSNSNGSYNNSDEIDHAEAYSVSSNSDIQGVNDEFSSSHNFGSMSCLSDAECNISINSSTESSQSCYMLTESHSRSSGSATGKQHAHG 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00825 727 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 506 697 - -
Tsu05g00825 727 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 503 - -
Tsu05g00825 727 Coils Coil 345 365 - -
Tsu05g00825 727 Coils Coil 179 255 - -
Tsu05g00825 727 Coils Coil 587 614 - -
Tsu05g00825 727 Coils Coil 512 553 - -
Tsu05g00825 727 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 503 - -
Tsu05g00825 727 PANTHER FILAMENT-PLANT-LIKE PROTEIN 506 697 - -
Tsu05g00825 727 Coils Coil 380 400 - -
Tsu05g00825 727 Pfam Filament-like plant protein, long coiled-coil 500 621 IPR008587 -
Tsu05g00825 727 Pfam Filament-like plant protein, long coiled-coil 93 500 IPR008587 -
Tsu05g00825 727 Coils Coil 62 96 - -
Tsu05g00825 727 MobiDBLite consensus disorder prediction 621 651 - -
Tsu05g00825 727 SUPERFAMILY Tropomyosin 61 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00825 Tsu-Chr5 7033808 7038555 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00825 - - gmx:100809230 783.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00825 05 7033808 7038555 Tsu05g00825 05 7033808 7038555 ECH