Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00808 ATGTTGCAGAGACCTAGACGCCGTTGTGAAGGTACAGCCATGGGAGCTATCGTTCTCGATCTCCGTCCTGGTCTCGGAATCGGTCCTTTCTCTCTAGGGATGCCTATATGTGAAGCATTTGCTCAGATAGAACAGCAACCTAATTTATACGATGTTGTGCACGTGAAGTATTTTGATGAGGAACCCCTGAAGTTGGATATTGTTATTAGTTTTCCTGATCATGGTTTTCATCTTCGTTTTGATCCCTGGTCTCAGAGACTGCGCCTTATTGAAATATTTGATGTAAAGCGGCTTCAAATGCGCTATTCTACTTCTTTGATTGGGGGACCAACAACTCTAGCTACTTTTGTTGCCGTATATGCACTGTTTGGACCCACATACCCTGGAATTTTCGATAAGGATAGAGGCATCTACACGCTGTTTTACCCAGGGCTTTCCTTTGCATTTCCTATTCCGGGTCAGTTTACAGACTGCTGTCATGATGGGGGAGTGGAATTGCCGTTGGAGTTTCCAGATGGGACAACACCAGTTACATGTCGCGTTTCAATATATGATAGTTCCTCTGGTAAGAAGGTTGGTGTAGGGTCCTTAATGGATAAGGCTTCTGCCCCCCCATTACCCACTGGCAGCATTTACATGGAAGAGGTTCACGTTAAGCTTGGGGAAGAATTGTACTTTACTGTTGGCTCCCAACGTATTCCTTTTGGTGCATCCCCACAGGATGTGTGGACTGAGCTAGGACGTCCCTGTGGTATTCATCAAAAGCAGGTAGATCAAATGGTTATACATTCTGCCTCTGATCTTCGGCCACGGACAACTATCTGCGGAGATtacttttataattattttaccCGTGGTCTGGACATCTTATTTGATGGACAGACTCACAAGATCAAGAAGTTTGTTTTACATACGAACTACCCTGGTCATGCTGATTTTAATTCATACATGAAGTGCAACTTCGTTATATATTGCTCTGATGTTGTTGGAGGATCTTTTCAGGATGTAAATAATAGCAAACAGAGGGTCATTACACCTAGTACAAAGTGGGAACAAGTGAAGGAAATACTTGGGGATTGTGGGCGAGCTGCCATTCAGACACAAGGTTCTGCCAGTAACCCATTTGGTTCTACTCTTGTATATGGTTATCAAAACATTGCTTTTGAGGTGATGAAAAATGGTTATATTGCAACAATAACTCTCTTCCAGTCATGA 1215 0.4288 MLQRPRRRCEGTAMGAIVLDLRPGLGIGPFSLGMPICEAFAQIEQQPNLYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYSTSLIGGPTTLATFVAVYALFGPTYPGIFDKDRGIYTLFYPGLSFAFPIPGQFTDCCHDGGVELPLEFPDGTTPVTCRVSIYDSSSGKKVGVGSLMDKASAPPLPTGSIYMEEVHVKLGEELYFTVGSQRIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDLRPRTTICGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYMKCNFVIYCSDVVGGSFQDVNNSKQRVITPSTKWEQVKEILGDCGRAAIQTQGSASNPFGSTLVYGYQNIAFEVMKNGYIATITLFQS 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00808 404 PANTHER UPF0183 PROTEIN 12 403 IPR039156 -
Tsu05g00808 404 Pfam Phagosome assembly factor 1 27 402 IPR005373 -
Tsu05g00808 404 PANTHER UPF0183 PROTEIN C16ORF70 12 403 IPR005373 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00808 - - gmx:100781434 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00808 05 6889273 6894274 Tsu05g00808 05 6889273 6894274 ECH