Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00772 ATGGTCAAGAAAACAGTCTTGAAGGTTGATATTGATTGTCCCAAATGCAAAAAGAAGGTCCTCAAAACTGTATCTTCTCTTCAAGGTATAGACAAAATTGAAGCAGATGAAGGGAAAGGAACATTGACTATAATAGGGGATGCAGACCCATATGACATAATAGTTCGAATAAGGAAAGCTGGGAAAAATGCTGAAGTTGTGAGCATTGGGCCTCCACCTGGCCCACCTCCTCCTCCAAAGAAGCCCGAAGAAAATAAAAAGCCCGAAGAAAAGAATAAGCCCGACCCAGTAAAGAATCTGGACCAAATATCCTATGTACCCTATATGCAGATGCCTTATTACTACCCACAATATCAGGCCCAGCCAGTGGCTGTGGTGCACATGACTAGGTGGGACGAGCCAAATACATCTTGCACTATATTGTGA 426 0.4296 MVKKTVLKVDIDCPKCKKKVLKTVSSLQGIDKIEADEGKGTLTIIGDADPYDIIVRIRKAGKNAEVVSIGPPPGPPPPPKKPEENKKPEEKNKPDPVKNLDQISYVPYMQMPYYYPQYQAQPVAVVHMTRWDEPNTSCTIL 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00772 141 PANTHER OS04G0661100 PROTEIN 2 140 - -
Tsu05g00772 141 Pfam Heavy-metal-associated domain 7 62 IPR006121 GO:0046872
Tsu05g00772 141 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 2 140 - -
Tsu05g00772 141 MobiDBLite consensus disorder prediction 80 97 - -
Tsu05g00772 141 MobiDBLite consensus disorder prediction 65 100 - -
Tsu05g00772 141 CDD HMA 6 65 IPR006121 GO:0046872
Tsu05g00772 141 Gene3D - 1 72 - -
Tsu05g00772 141 SUPERFAMILY HMA, heavy metal-associated domain 1 67 IPR036163 GO:0046872
Tsu05g00772 141 ProSiteProfiles Heavy-metal-associated domain profile. 11 66 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00772 Tsu-Chr5 6511444 6512382 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00772 - - mtr:MTR_5g020960 165.236
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00772 05 6511444 6512382 Tsu05g00772 05 6511444 6512382 ECH