Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00771 ATGAAAGTGGCACAAGTATTACACATGAATGGAGGAATTGGAGAAACAAGTTATGCAAATAACTCCATACTTCAgAAAAAGGTTCTTTCTTTGACAAAAGAAATGAGAGATGAAGCCATAAAGAACCTTTGCTACATACAATTCCCAAAAAGACTAGGAATTGCATATTTAGGTTGTTCTTCTGGACCAAACACTTTGTTTGCGATATCTGAAATTATCAAATTAGTTGAAAAACTTTGCAAAGAACAAAACCACGAGTCTCCAGAATATCAAGTTTTTTTGAATGATCTTCCGGGAAATgatttcaacaatatttttaagTCACTTgataaattcaaagagaaactaaatggtgaatttgaagGTGGGATCGGTCCTGCATGCTTTTTCAATGGTGTTCCTAGTTCTTTTTATGGCAGGATTTTTCCAACTAAATCTCTTCATTTTATTCATTCCTCTTATAGCCTTCAATGGCTATCTCAGGTTCCTAAAGGTGTGGAGAATAATAAGGGTAATATTTACATGGCTAACACAAGCCCTGAAAATGTGCTCAAGGCTTACTATGAACAATTCCAAAAAGATTTCTCATTGTTTCTCAAGTGTCGTGCGGAAGAGCTTGTTGAAAGGGGTCGTATGGTTCTAACTATTTTGGGAAGAAAAAGTGACGATAAATATAGCAAAGAGTGTTGCTATATTTGGGAGCTTCTTGCTGTTGCTCTTAATGAGATGGTCTTGGAGGGAATCATAATGGAAGAGCAAATGGACACTTTCAACATTCCTCAATATACACCATCGTCGTTAGAAGTAAAATTAGAGATTTTGAGAGAAGGGTCGTTCACTATTGATCGTATGGAGATAACAAAAATACATTGGAATGCTTACAATGATTGGAATGATATCAATATCGAAAGTAGTTTGCCTGAATCACGCATTGATGGGGCATACAATGTCACAAATTGCATGAGGGCTGTGGCTGAACCTTTGTTGGCCAATCACTTTGGAGAAGCAATTATTGAAGAAGTTTTCGGACGATATCTAGAAATTTTAGTTGATCGAATGTCTAAGGAAAAAACTGAATTCATTAATGTGAGCATATCAATGACGAAAAAAGTATGA 1116 0.3423 MKVAQVLHMNGGIGETSYANNSILQKKVLSLTKEMRDEAIKNLCYIQFPKRLGIAYLGCSSGPNTLFAISEIIKLVEKLCKEQNHESPEYQVFLNDLPGNDFNNIFKSLDKFKEKLNGEFEGGIGPACFFNGVPSSFYGRIFPTKSLHFIHSSYSLQWLSQVPKGVENNKGNIYMANTSPENVLKAYYEQFQKDFSLFLKCRAEELVERGRMVLTILGRKSDDKYSKECCYIWELLAVALNEMVLEGIIMEEQMDTFNIPQYTPSSLEVKLEILREGSFTIDRMEITKIHWNAYNDWNDINIESSLPESRIDGAYNVTNCMRAVAEPLLANHFGEAIIEEVFGRYLEILVDRMSKEKTEFINVSISMTKKV 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00771 371 PANTHER SAM DEPENDENT CARBOXYL METHYLTRANSFERASE-RELATED 1 369 - -
Tsu05g00771 371 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 1 369 IPR005299 GO:0008168
Tsu05g00771 371 Pfam SAM dependent carboxyl methyltransferase 38 369 IPR005299 GO:0008168
Tsu05g00771 371 Gene3D Vaccinia Virus protein VP39 21 358 IPR029063 -
Tsu05g00771 371 Gene3D - 6 356 IPR042086 -
Tsu05g00771 371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 370 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00771 Tsu-Chr5 6502255 6510187 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00771 K21483 - gmx:100170650 550.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00771 05 6502255 6510187 Tsu05g00771 05 6502255 6510187 ECH