Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00769 ATGAAacattttgctttatttttccttttagcCATTTTAGTCCATCAAGAGTATTATTGTTTCAATGTAGAAGCTTCTGCTGGTGATGGTTTTGTTAGAACAAGAGGCATCCATTTCATGTTAAATGGAAATCCTTATTATGCAAATGGATTTAATGCTTATTGGTTAATGTATACAGCTGCTGATCCATCTCAGAGATTCAAAGTTTCAAATGCTTTCCATGAAGCTACATCTCATGGTCTTACTGTTGCTAGAACTTGGGCTTTTAGTGATGGTGGTTATAGTCCTTTGCAATATTCTCCTGGCTTCTATAATGAACAAATGTTTAAGgGGTTGGATTTTGTTATAGCTGAAGCTAGAAAGCATGGGATTAAGCTCATACTAAGCTTGGTGAACAACTATGAGAGTTTTGGAGGAAAGAAGCAGTATGTGAACTGGGCTAGAAGTAATAATGGACAGTATTTGACATCAGATGATGATTTCTTTAGGAACCCTGTTGTTAAAGGTTTCTACATCAACCATGTTAAGACTGTTCTTAACAGGTACAACAGTTTTACTGGAATTCATTACAAAGATGACTCAACAATAATGGCATGGGAGCTTATGAATGAACCTAGGTGTACATCAGATCCTTCAGGAAGAACTATTCAGGCTTGGATTACGGAAATGGCTTCTTTAGTAAAGTCCATTGACAGGAATCACTTATTGGAAGCTGGACTTGAAGGGTTTTATGGTCAATCAACACCACAAAGGACACAATTAAATCCTGCTTTGAATATAGGAACAGATTTCATTGCCAACAATCGAATCCAAAACATTGATTTTGCAACAGTTCATTGTTATCCCGACCAATGGGAACAAAATTCAAATGAGCAAGATCAACTAGCATTTTTGAATAACTGGCTCAATGCTCATTTCCTAGATGCACAATATGCTCTAAAGAAACCAATACTTGTAGCAGAATTCGGAAAATCATTCAAAGATTCTGGTTACAGTACCTACCAGAGAGATCAACTTTTCAGTACCGTGTACTACAAGATATATGCGTCTGCGAAAAGAGGAGGTCCTGCAAGCGGAGCAATGTTCTGGCAACTTCTTACCGGAGGAATGGAATCTTTTGACGATGGTTATGGAGTAATGCTTGGCCAGGGTTCTTCTACTGCTAATGTCATTGCTCAACAGTCTCATAAGTTATACCTTATTCGGAAGATCTATGCAAGGATCGCTAATGAACGAAGATGGAAAAGAGCTAGAGTTAATCGAAGGTCTTCGCGATTTGGTGGAAATAGAGGAGGACAAATTgggttttga 1311 0.3692 MKHFALFFLLAILVHQEYYCFNVEASAGDGFVRTRGIHFMLNGNPYYANGFNAYWLMYTAADPSQRFKVSNAFHEATSHGLTVARTWAFSDGGYSPLQYSPGFYNEQMFKGLDFVIAEARKHGIKLILSLVNNYESFGGKKQYVNWARSNNGQYLTSDDDFFRNPVVKGFYINHVKTVLNRYNSFTGIHYKDDSTIMAWELMNEPRCTSDPSGRTIQAWITEMASLVKSIDRNHLLEAGLEGFYGQSTPQRTQLNPALNIGTDFIANNRIQNIDFATVHCYPDQWEQNSNEQDQLAFLNNWLNAHFLDAQYALKKPILVAEFGKSFKDSGYSTYQRDQLFSTVYYKIYASAKRGGPASGAMFWQLLTGGMESFDDGYGVMLGQGSSTANVIAQQSHKLYLIRKIYARIANERRWKRARVNRRSSRFGGNRGGQIGF 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00769 436 Pfam Cellulase (glycosyl hydrolase family 5) 68 335 IPR001547 GO:0004553|GO:0071704
Tsu05g00769 436 Gene3D Glycosidases 27 402 - -
Tsu05g00769 436 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 1 422 - -
Tsu05g00769 436 SUPERFAMILY (Trans)glycosidases 31 390 IPR017853 -
Tsu05g00769 436 PANTHER - 1 422 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00769 Tsu-Chr5 6489218 6492857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00769 1 418 Glycoside Hydrolase AT5G66460 67.464 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00769 K19355 - gmx:100792073 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00769 05 6489218 6492857 Tsu05g00769 05 6489218 6492857 ECH