Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00767 ATGGGAACATTGGGCAGAGCTTTCTACGCCGTCGGATTCTGGATCCGCGAAACCGGTCAAGCCATTGATCGTCTCGGTTCACGTCTTCAAGGCAACTACTTCTTCCAAGAACAACTGTCAAGGCATCGAACTTTGATGAATGTATTTGATAAAGCTCCTTATGTTCATAAGGATGCGTTTATTGCTCCTAGTGCTTCCATTACTGGTGATGTTCAAATTGGTCAATCTTCTTCCATTTGGTATGGTTGTGTTCTAAGAGGTGATGTTAACAGCATTACTATTGGATCTTCAACTAATATACAAGACAATTCTCTTGTCCATGTTGCTAAGTCTAATTTGAGTGGAAAGGTATTACCCACTATCATTGGAGATAATGTCACTGTAGGTCATAGTGCTGTGTTGCAAGGGTGTACTGTTGAGGATGAGGCATTCATTGGCATGGGTGCAACCTTGCTTGATGGTGTGTATGTTGAGAAACATGCCATGGTTGCTGCTGGAGCTCTTGTCAGACAGAATACAAGGATCCCCTGTGGAGAGGTTTGGGGAGGTAATCCAGCAAGGTTCTTGAGGAAGCTCACAGAAGATGAAATGACATTCTTCTCACAATCCGCCCTAAATTATTCCAATTTGGCTCAGGCTCATGCTGCTGAAAATGCAAAAAAGCTGGATGAGACTGAATTTGTGAAAGTTCTTGGCAAGAAGTTTGCTCGACCTGACGAAGGTTCACTACTGGACGCTGTTCGCGACACAACTCCAGAGATTAACCCCCCTGTGCTAGATAATGCTCCAAAGGcttaa 798 0.4373 MGTLGRAFYAVGFWIRETGQAIDRLGSRLQGNYFFQEQLSRHRTLMNVFDKAPYVHKDAFIAPSASITGDVQIGQSSSIWYGCVLRGDVNSITIGSSTNIQDNSLVHVAKSNLSGKVLPTIIGDNVTVGHSAVLQGCTVEDEAFIGMGATLLDGVYVEKHAMVAAGALVRQNTRIPCGEVWGGNPARFLRKLTEDEMTFFSQSALNYSNLAQAHAAENAKKLDETEFVKVLGKKFARPDEGSLLDAVRDTTPEINPPVLDNAPKA 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00767 265 Pfam Hexapeptide repeat of succinyl-transferase 119 151 IPR001451 -
Tsu05g00767 265 CDD LbH_gamma_CA_like 55 212 - -
Tsu05g00767 265 SUPERFAMILY Trimeric LpxA-like enzymes 47 212 IPR011004 -
Tsu05g00767 265 Gene3D Hexapeptide repeat proteins 43 223 - -
Tsu05g00767 265 PANTHER YRDA, PUTATIVE-RELATED 1 265 - -
Tsu05g00767 265 PANTHER DYNACTIN SUBUNIT P25 1 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00767 Tsu-Chr5 6474497 6477968 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00767 K01726 - gmx:100794184 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00767 05 6474497 6477968 Tsu05g00767 05 6474497 6477968 ECH