Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00744 ATGGATTCAATGGAGTTCAAATTGAGTGAACTATTGAAAGAAGTTCAACTAAATTACTCTCCTCAGTTTTCTAAACTCGTAAACGACACCGTTTCATCCATCAAATCATCCATTGATAAAATCCCTGAAGACTATAAGGTAACTTCTGATTTGGCACCAAATTTTGTTAGGGACATTGGTGCTGATAAAGTGGAGTTCAAATTTAAGAAACCATCGGTTTTTAAGATTGGTGGTAGTTACTCCATACAAAGTCTTACTAGGCCTGAATTAAATGTGGACCTTATTATAAGGTTGCCAAAGGAGTGCTTCCATGAGAAGGATTATTTGAACTATAGGTATCACGGCAAGAGGTGTCTTTATCTCTGCTTGCTGAAAAAGTATTTGGAGAAATCTTCATCTATTGATAGGGTTGAATGGTCTACCCTACAGAATGAAGCTCGAAAGCCTTTACTGATTGTGTATCCTGCTGCAAAGCTTGTTGATGGTTTTTTTGTGAGAATTATTCCATCTGCTACATCTATCTTTAACATAGCAAAGTTAAACCTGACGCGTAATAACATTCATAATTCGAATAACGAAGGGAGTTCTGTTCAAGCTACACCGAAGTATAATTCTAGTATTTTGGAAGACATGTTTATAGAGGATACTGAATTaatcaacaaattttttcttgaaTGGAAGGAACTAAGAGAGGCTTTAATACTACTTAAgGTATGGGCTCGACAGAGAAGTTCAATATATGCTCATGATTGCCTGAATGGATTTTTGCTATCTATCATACTGGCACATCTCGCTTCCAGGCAACAAATTAACAAGTCAATGAAGGCAATTGAAATGATCCGTATTACCTTAAACTTCATTGCTGCATCAGAGACATGGAGCCGCGGTCTCTACTTTCCAAAGGAAGGCCAGGGAAATATTACTAAAGAGGAAAGGATACAACTTAAAGGGTCATTTCCAGTTGTCATATGTCATCCATCGGGGGCTTTCAATTTGGCTTTTCGAATGTCTAGGATTGGTTTTACTCAGCTTCAAGACGAGGCTGCTTCAACACTTAAATGCATGGAAAAGTGTAGAGGTGGTGGATTTGAGGAAGTTTTTATGAACAAGATTGACTATGCTGTTAAATATGACTATTGTATGAGAATAAACTTTAAGGGACACAAGGAGCTATATGCATCAGGATTTTGTTCGGATGAGGAATGCTGGAGATTGTATGAGGAGAAAATACATGCTATATTAGCTAAAGGGTTGAATGATAGAGCAAAGTTCATTCGAGTTATATGGAGAAATGCAAAATGCCAGTGGAGTGTGAATGATGGCTTGTCAGTACTTGATAAAGAGCCCCTGTTCATAGGAATTTCAGTCAGTAATTTGGAGAAAGCATTTAGGATGGTTGATATTGGTCCAAATGCTGAAAGTAAAGAAGAGGCTCTTGAATTTCGAAAGTTTTGGGGAGAAAAATCAGAACTTAGAAGATTTAAAGATAGTAGAATTGCAGAAAGCACAGTATGGGAATGCCAGAAATGGGAAAGACAtctgattttgaaaaaaatagctGAGCATGTGCTCAGTCGGCATCTATCTCTATCCAAGGAAAATATTGTAGTAGTTGTGGATCAACTTGATTTCTCTTTGGCTCATGGTGCTGCAGATCCTATATCACACTCTGGAAATTTGCTCGAGGCATTTGATGCTCTGTCAAAGCGTCTGCGTCTTATTGGAAACCTCCCTTTGAAGGTGTCTAGCGTACAACCTTTAGACTCTGCATTCAGGTTTACATCAGTCTTCCCTCCTGAACCTCATCATCTAGctaatgaaaaaattgaatctCTCAGACTGAATAAGTTGGTCCCGTCTTGCATTCAACCACTAGAAATTATGATTCAGCTTGAAGGTTCTGGGAACTGGCCAATGGatgaaattgcaattgaaaaaacaaagtCTAGTTTCCTTATTCAAATTGGGGAAAGGTGGGAACTTGTGTCCTTTATTTGCTTCAGTATCTTGCTTTTTTTCAGTGTTAATATGACACAATTATGTTATCATGGCAGTCTTCAAAAGAAATGGGGGATGACTTGCACTGCTACTGAGGATGATGTGGATGTGTTAATGTCAGGATATGCCTTTCGTCTTAAACTTTTGCATGAGAGGGCCCTTAGTTTAATTGGGAGTGATCAAAGATCGCGGGTACATTCTGCAGACAAGAAACTTCTGATTCGTAGTCAACATGCTAGCATGATCAATGGACTGCAAAGTCTTTACCCAATATATGGACCAGTAGTTAGACTAGCAAAACGTTGGGCTGCTTCACATCTATTTTCCGCTTGTTTGGTAGAGGAGGCCATTGAGTTATTGGTTGCATATCTCTTTCTCAATCCTTTGCCATTTGATGCTCCCTGCTCACGGATCACCGGATTTTTAAGGTTCCTGCAGTTGCTCTCAAACTACGATTGGACTTTTTCTCCCTTGGTTGTTGACATAAATAATGACTTGAGCcaaagtgataaaaaagaaataaatGATAACTTTTTGCTAAGAAGAAAAGGTCAGGGAGAGAATGGGGAAAATGTAGGGCCAGTGATGTTCTTGGCTACAGTTTATGATAAAGCTTCTGAGGCTTGGACTGGATTATCACCTAGTGCACTGGAACTTAAAAGGTTAGTTGCATATGCCCGGAGCAGTGCAAATTTGCTGACGAAACTCACATTTCAGGATGAGATTGGTCCATTTAGATGGGAGTGCATTTTACGAACTCCTTTAAACAATTATGATGCAATCATCATTCTCCACAAGGACAAACTCGCGTATCCTCAAAGGCTACTCTTTTCATCAGAAGTTGTTAACGGAACCCAAGTTGCTAAAGGACATGCTAGCAAGTTCTTCCAACCCTTTTTGTTGCCTAAAGATTTGAAATGTAGGCCAGAGGAACTTAAAAATAAGTTGCTGGTAGACTTCAATCCATCAAGGTGCTTTATCAAAGATTTAGAGGCAAAGTTTTCTACCACATTCCAGTTATGGCATGATTCTCTAGGAGGTGATGCCATCGGCCTAACGTGGAGGAAATCGAATCCTACCAAGaaGCGGAAGCAAGAGGAAGTGGTTGAGGAAGAATATGACCCTCGGAAGGTGCTAAAAGCGGTAGGTGAAGTTGGAAAAGGTTTCAATCGAATCTAtttgttgtatttttcttgCACACGCACGCTTGTTCTACAAGAAAGAATGGATTCAAACAGCAAGCAGATTGATGAAAAACTACAAGTCAAGCCAGCACAAAAAGTTACATTCTGTCAAAGAAATAAGTCTGGGAATGGGAGTTTTGTGTCTAAATTAAGAGACCACTTTCATGAATTTATCCATGCATCTGTTGATGAACACAAGAGATGCTTGAGAAACACCATTGAAAAGATGAAACAGATATTTAATGCATCAGGTTTTGGAAAACACAGTGAAAGCACAAACGAAGGTGAAAACGAAAAATCGGTACAACTTCATTCATCTACAAGGAACTAG 3513 0.3803 MDSMEFKLSELLKEVQLNYSPQFSKLVNDTVSSIKSSIDKIPEDYKVTSDLAPNFVRDIGADKVEFKFKKPSVFKIGGSYSIQSLTRPELNVDLIIRLPKECFHEKDYLNYRYHGKRCLYLCLLKKYLEKSSSIDRVEWSTLQNEARKPLLIVYPAAKLVDGFFVRIIPSATSIFNIAKLNLTRNNIHNSNNEGSSVQATPKYNSSILEDMFIEDTELINKFFLEWKELREALILLKVWARQRSSIYAHDCLNGFLLSIILAHLASRQQINKSMKAIEMIRITLNFIAASETWSRGLYFPKEGQGNITKEERIQLKGSFPVVICHPSGAFNLAFRMSRIGFTQLQDEAASTLKCMEKCRGGGFEEVFMNKIDYAVKYDYCMRINFKGHKELYASGFCSDEECWRLYEEKIHAILAKGLNDRAKFIRVIWRNAKCQWSVNDGLSVLDKEPLFIGISVSNLEKAFRMVDIGPNAESKEEALEFRKFWGEKSELRRFKDSRIAESTVWECQKWERHLILKKIAEHVLSRHLSLSKENIVVVVDQLDFSLAHGAADPISHSGNLLEAFDALSKRLRLIGNLPLKVSSVQPLDSAFRFTSVFPPEPHHLANEKIESLRLNKLVPSCIQPLEIMIQLEGSGNWPMDEIAIEKTKSSFLIQIGERWELVSFICFSILLFFSVNMTQLCYHGSLQKKWGMTCTATEDDVDVLMSGYAFRLKLLHERALSLIGSDQRSRVHSADKKLLIRSQHASMINGLQSLYPIYGPVVRLAKRWAASHLFSACLVEEAIELLVAYLFLNPLPFDAPCSRITGFLRFLQLLSNYDWTFSPLVVDINNDLSQSDKKEINDNFLLRRKGQGENGENVGPVMFLATVYDKASEAWTGLSPSALELKRLVAYARSSANLLTKLTFQDEIGPFRWECILRTPLNNYDAIIILHKDKLAYPQRLLFSSEVVNGTQVAKGHASKFFQPFLLPKDLKCRPEELKNKLLVDFNPSRCFIKDLEAKFSTTFQLWHDSLGGDAIGLTWRKSNPTKKRKQEEVVEEEYDPRKVLKAVGEVGKGFNRIYLLYFSCTRTLVLQERMDSNSKQIDEKLQVKPAQKVTFCQRNKSGNGSFVSKLRDHFHEFIHASVDEHKRCLRNTIEKMKQIFNASGFGKHSESTNEGENEKSVQLHSSTRN 1170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00744 1170 Gene3D - 205 373 - -
Tsu05g00744 1170 Pfam Nrap protein PAP/OAS-like domain 229 370 IPR035367 -
Tsu05g00744 1170 MobiDBLite consensus disorder prediction 1145 1170 - -
Tsu05g00744 1170 Pfam Nrap protein domain 3 374 529 IPR035368 -
Tsu05g00744 1170 PANTHER NUCLEOLAR RNA-ASSOCIATED PROTEIN 2 1056 IPR005554 -
Tsu05g00744 1170 Pfam Nrap protein domain 6 921 1055 IPR035371 -
Tsu05g00744 1170 Pfam Nrap protein domain 1 92 215 IPR035082 -
Tsu05g00744 1170 Pfam Nrap protein PAP/OAS1-like domain 5 755 905 IPR035370 -
Tsu05g00744 1170 Pfam Nrap protein nucleotidyltransferase domain 4 555 752 IPR035369 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00744 K14544 - gmx:100776157 1670.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00744 05 6267292 6278604 Tsu05g00744 05 6267292 6278604 ECH