Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00721 ATGGAGCCTCAAAAATCTTTTTTAGCTTCAAAatttttgttcttgttgattttctttcttattACCATTTCCTTGTGTGAATTAAATGCATTATCAAGTGAGGAGCAGAATGTGAAGTCTCACAAAGGACCTGTGGTGAAGAGGGATCAAAGGAGGACATTAGTTGACACTGAATATGGAGAGATTTCTGCTACTGATGTTAAAGAAGGACATAATAAATCACCAAATTATCATATTCAGTTCTTTACATTGGAACCTAATTCTGTGTTTCTTCCTGTGCTTTTACAAGCAGCTATGGTCTTTTATGTTCATACAGGTAGTGGAAAGCTGAGTTGGTCAAATGAAGATGGAACTGGCACAACGGATATACATGAAGGTGATGTAGGCAGTCTCAAAGAAGGATCTGTTTTCTATATACACAGTAACTTGGAAGCACAAAGAAAGAAACTAAGGATTTATGCAATATTTACCAACACAGATGATAGCACTTTTGATCCATCAATTGGTGCTTACTCAAGGATCAATGAATTAGTCCAAGGATTTGACGAAAAAATCATCCAAGCTGCTTTTAAGgTGCCTGAAGATTTGATTGAAGCAATCACAAACAAGACTGAGACACCAGCAATAGTGCATGCAGGTCCAGAGAAAAAGCATAACAATGTCTTGGAATTGGAGGGTTCGTTACTTAAATACTTCACAGGCATTGAATCCAACTCCAAGAAGCTCAAAACATACAACATCTTTGATAGTGACCCTGACTTCGAAAATTGTTATGGTTGGACCTCAACAGTGACCAAAAAGCAACTAAAAAGATTGAAGAGTCACAACATTGGAGTTTTTATGGTGAACTTGACCAGGGGATCAATGCTGGGGCCACATTGGAATCCATTGGCAACAGAAGTAGCAGTGGTGTTGGAAGGGGAAGGTATGGTGAGAGTAGTAGGTGGTAGCAACAATGATGATGAATCCAAAAACCAGAGATTTAGGGTTAAGCAAGGAGATGTTTTTGTGGTTTCTAAGTTTCATCCAATGGCTCAAATGTCATTTAATAATGAGCCACTTGTTTTTATGGGATTTAGCACTGCTGCAAAGAAAAATCATCCTCAGTTTTTGGCTGGTAAAGAATCAGTGCTACAAATTCTAGACAAACAGATAGTTGCTACCTCTTTAGGTGTAAGCAAAATAACTATTGACAAGCTTTTGGAGAAACCGGATGATTCCATCATTTTCGAGTGTAGTTCTTGTGCGGAGGAAGAGGAGAAGTTAATGGAGGAAGAAAAGGAGAAGGAAAGGGAGGAGGAagagaagaggaagagagaggaagaggaagaagatgagaaaaggagagaaaagGAGGAGGAAGAAAAGGAGAAGGAAAGGGAGGAGGAagagaagaggaagagagaggaagaggaagaagatgagaaaaggagagaaaaagaggAGGAAGAGGAAAAGGAGagggaaagaagagaaaaagaagaggaggaagttaaaagaagagaagaagaaaggaaaagagAGGAGGAAGAAGCTAGAAGGCAACAAGAAGAGAGGGAAAGGAGGAGAAGAGAAGAGGAGGAAGCAAGGAAAGAAGAAGAGGCAAGGAGGGAACAAGAAGAAATTAGAAGACggaaagaaaaggaaagagaagaagaagcgGAGAGGGAGGAAGCAGAAGCTAGAGAacaaagagaaaagagagaagaagcggagagggaggaagaagaagcTAGAAGACAAcaagagaaaagggaaaagaaagaggaGGAAGctaggagagaaaaagaaagagaagaggaGGAAGCTAGAAGAGAAGTGGAGGAGGAAACTAGAAAGCaacaaaagaaaagggaaagaaaagagGAGGAAGctaggagagaaaaagaaagggaaGAAGAGGAAGCTCTAAGAGAAATGGAAGAGGAAGCTAGAAAGCAACAAGAGAGAAGGGAAAAGAGGAGAAAAGAGGAAATAGAGagggagaaagaaaggaaaagagaagaagCAGAGAGCGAGGAAGAAGCAGCGAGAAGACAACAAGAAAAGAGGGAAAGAAGGAGACAAGAGAGTGAAGCTAGGACTGAGGAAGAAAGGAGGGAAACAGAAGAGCAAGAAGATGAGTCTGAGAGCCAAAGAGAAGGAAGGAGGAGACAAAAGGGTGGGGACAGAGAAAGAATAAGTAGAGAAGAAGCATCAACTGAATGGGAAGAAGCAGCAGCCAAAAGACAACAAGAAGAAAGGGAAAGGAAAAGAGAGCAAGACAGTGAGAGCTCCTTTGAAGGAAGGAGAATTCTGAAGATTCGAAAGAGTGTGTGA 2319 0.3394 MEPQKSFLASKFLFLLIFFLITISLCELNALSSEEQNVKSHKGPVVKRDQRRTLVDTEYGEISATDVKEGHNKSPNYHIQFFTLEPNSVFLPVLLQAAMVFYVHTGSGKLSWSNEDGTGTTDIHEGDVGSLKEGSVFYIHSNLEAQRKKLRIYAIFTNTDDSTFDPSIGAYSRINELVQGFDEKIIQAAFKVPEDLIEAITNKTETPAIVHAGPEKKHNNVLELEGSLLKYFTGIESNSKKLKTYNIFDSDPDFENCYGWTSTVTKKQLKRLKSHNIGVFMVNLTRGSMLGPHWNPLATEVAVVLEGEGMVRVVGGSNNDDESKNQRFRVKQGDVFVVSKFHPMAQMSFNNEPLVFMGFSTAAKKNHPQFLAGKESVLQILDKQIVATSLGVSKITIDKLLEKPDDSIIFECSSCAEEEEKLMEEEKEKEREEEEKRKREEEEEDEKRREKEEEEKEKEREEEEKRKREEEEEDEKRREKEEEEEKERERREKEEEEVKRREEERKREEEEARRQQEERERRRREEEEARKEEEARREQEEIRRRKEKEREEEAEREEAEAREQREKREEAEREEEEARRQQEKREKKEEEARREKEREEEEARREVEEETRKQQKKRERKEEEARREKEREEEEALREMEEEARKQQERREKRRKEEIEREKERKREEAESEEEAARRQQEKRERRRQESEARTEEERRETEEQEDESESQREGRRRQKGGDRERISREEASTEWEEAAAKRQQEERERKREQDSESSFEGRRILKIRKSV 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00721 772 SMART Cupin_1_3 245 398 IPR006045 -
Tsu05g00721 772 SMART Cupin_1_3 44 198 IPR006045 -
Tsu05g00721 772 PANTHER PREPROMP73 12 455 - -
Tsu05g00721 772 PANTHER OS03G0336100 PROTEIN-RELATED 12 455 - -
Tsu05g00721 772 Coils Coil 729 749 - -
Tsu05g00721 772 Pfam Cupin 52 192 IPR006045 -
Tsu05g00721 772 Pfam Cupin 245 394 IPR006045 -
Tsu05g00721 772 Gene3D Jelly Rolls 232 414 IPR014710 -
Tsu05g00721 772 CDD cupin_7S_vicilin-like_C 252 407 - -
Tsu05g00721 772 MobiDBLite consensus disorder prediction 419 700 - -
Tsu05g00721 772 CDD cupin_7S_vicilin-like_N 54 216 - -
Tsu05g00721 772 MobiDBLite consensus disorder prediction 709 772 - -
Tsu05g00721 772 MobiDBLite consensus disorder prediction 419 772 - -
Tsu05g00721 772 SUPERFAMILY RmlC-like cupins 21 401 IPR011051 -
Tsu05g00721 772 Coils Coil 413 712 - -
Tsu05g00721 772 Gene3D Jelly Rolls 34 223 IPR014710 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00721 10 429 Miscellaneous Gene Families AT2G18540 46.818 1.49e-121 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00721 - - cam:101506263 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00721 05 6091799 6095146 Tsu05g00721 05 6091799 6095146 ECH