Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00717 ATGGGAAAAGGAGGAGGTTGTGTTCCCAGCAAGAAACGAGCACCACCGATAACCGACCAATTGCCGCCGCCGAGCACCACCACTGAATCCAACAACTCAATCCAAGAAACACCATTACCACCACCAAAAACCGATTCAAAATCCAAAATCTTCATCGTTTTCTATTCGATGTACGGTCACGTCGAAGGTTTAGCTAAGAGGTTGAAGCAAGGTGTCGACGCCGTTGACGGTGTTGAAGGGGTTTTGTACAGAGTACCTGAGACATTGTCAATTGAGGTCTTGAATCAGATGAAAGCACCGATTAAAGATGAAACTATTCCGATTATATCGCCCGAGGAGCTTGTTGATGCTGATGGTTTTTTGTTTGGGTTTCCTACTAGGTATGGTTCTATGGCTGCTCAGATGAAGGCTTTTTTTGACTCTACTGGGAGTTTATGGAAGGGGCAGAAGCTTGCCGGAAAACCTGCCGGATTCTTTGTTAGTACCGGGACTCAAGGTGGCGGTCAAGAAACCACTGCTTGGACGGCGATCACTCAACTGGCACATCAAGGAATGCTATTTGTTCCAATTGGATATACATTTGGACCTGGAATGTTCAATATGGACAACATTAGAGGTGGTTCTCCATATGGTGCAGGAGTGTTTGCAGGTGATGGCACAAGAGAGCCAAGCGAAACTGAACTTGCACTTGCTGAGCATCAGGGCAAGTATATGGCTGCGGTAGTCAAGCGGCTTGTCAAGTCCTGA 747 0.4685 MGKGGGCVPSKKRAPPITDQLPPPSTTTESNNSIQETPLPPPKTDSKSKIFIVFYSMYGHVEGLAKRLKQGVDAVDGVEGVLYRVPETLSIEVLNQMKAPIKDETIPIISPEELVDADGFLFGFPTRYGSMAAQMKAFFDSTGSLWKGQKLAGKPAGFFVSTGTQGGGQETTAWTAITQLAHQGMLFVPIGYTFGPGMFNMDNIRGGSPYGAGVFAGDGTREPSETELALAEHQGKYMAAVVKRLVKS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00717 248 Pfam NADPH-dependent FMN reductase 64 189 IPR005025 GO:0016491
Tsu05g00717 248 MobiDBLite consensus disorder prediction 23 42 - -
Tsu05g00717 248 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 25 247 - -
Tsu05g00717 248 MobiDBLite consensus disorder prediction 1 43 - -
Tsu05g00717 248 PANTHER NAD(P)H DEHYDROGENASE (QUINONE) FQR1-LIKE 2-RELATED 25 247 - -
Tsu05g00717 248 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 49 245 IPR010089 GO:0003955|GO:0010181
Tsu05g00717 248 SUPERFAMILY Flavoproteins 49 245 IPR029039 -
Tsu05g00717 248 Gene3D - 45 246 IPR029039 -
Tsu05g00717 248 ProSiteProfiles Flavodoxin-like domain profile. 50 238 IPR008254 GO:0010181
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00717 Tsu-Chr5 6040855 6044075 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00717 K03809 - atr:18421453 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00717 05 6040855 6044075 Tsu05g00717 05 6040855 6044075 ECH