Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00716 ATGGCGGCAGAAACACTCTCTGCTTTGAGGTCTTTGATGGCTTCTCACTCTCCACCTCTTCATGCTTTAGTCGTTCCTTCTGAAGATTATCATCAGAGTGAATATGTATCTGCACGTGATAAACGTCGCGCATTTGTTTCTGGATTCACAGGAAGTGCTGGTTTGGCACTTATTACAAAGGATGAAGCTCTGCTTTGGACCGATGGACGCTATTTTTTGCAGGCTGAACAACAACTTAGTGCTCAGTGGAAGCTAATGCGTCTTGCTGAAGATCCTCCAGTAGATATCTGGATGGCTGATAATTTGCCAAAAGATGCAGCAATTGGGGTTGACCCTTGGTGCATTTCAATTGATACTGCTCAAAGATGGGAACGTTCTTTTGCCAAAAAACAGCAGAAGCTGGtccaaacaacaaaaaatttggTAGATGAAGTATGGGCAACTCGTCCACCAGAAGAAATTAATGCTGTCGTTGTACAACCATTAAAGTTTGCTGGTCGCTCTGTCACAGATAAGTTGAAAGATTTGAGAAAAAAGCTTGCACAGGAGCATGCTCGAGGAATCATTTTTACAGCACTCGATGAAGTTGCTTGGCTGTATAATATTCGTGGAAAAGATGTGGCATACTGTCCCGTTGTTCACGCATTTGCTATTGTGACATCCAATCATGCCTTTATTTATGTGGACAAGCGAAAGGTGTCTAATGAGGTTAAAACTCATTTAGAGGAGAATGGAATTGAAATTAAAGAGTATACAGAAGTAAGCTTAGACACGGCATTGCTTGCAACTGATGAACTTGATCACGTGTCTACTGCCAAGGGTAGTCTAGCGGAAGTTACGAAGGAATCTGAAAACTTACCCAGTGAAACCAATAAGATTGGAAATGGTAGACATCAAACAGGAGAAAAGAGTAGCAATCTCATATGGGCTGATCCAGGTTCATGCTGTTATGCTCTGTATTCAAAACTGAACCCTGATACAGTTCACTTGCAGCAATCACCTCTGGCTCTTCCAAAAGCTTTAAAGaACACCGTGGAATTGGATGGGTTAAGAAAGGCACATATTCGGGATGGTGCGGCTGTTGTGCAATATCTTGTTTGGCTGGATAAAAAGATGCAGGATTTTTATGGAGCATCTGGATACTTTTTAGAGGAGAATACTGTAAAAAAGGAGAAACATTTGCAGTCCTTGAAATTGACTGAGGTGACTGTAAGTGACAAGCTTGAAGAATTTCGAGCGTCAAAAGAGCATTTCAGAGGATTGAGTTTCCCTACCATTTCCTCAGTTGGCCCAAATGCAGCTATTATTCATTATTCTCCAGAGGCAGAAACATGTGCCGAGCTTGATCCAgacaaaatttatctttttgatTCTGGAGCCCAGTATCTGGATGGAACAACTGATATTACACGAACAGTTCATTTCGGGAGACCTTCGGATCATGAGAAAGCATGTTATACAGCGGTCCTGAAGGGTCACATTGCTCTGGGAAATGCTATATTTCCTAATGGGACAAATGGTCACGCGCTTGATATTCTTGCTCGAATTCCTTTGTGGAAGTATGGTCTTGATTATCGACATGGAACTGGTCACGGTATTGGGTCCTACCTGAATGTCCATGAAGGACCTcatttaatcagtttcagaacaCGAAATGTACCGCTGCAATCTTCCATGACCGTTACAGATGAACCTGGTTACTACGAGGACGGAGCATTTGGGATAAGATTGGAGAATGTGCTTGTTATCAACAAGGCTGatgcaaaatataattttggtgATAAAGGTTACTTATCGTTTGAGCATATTACCTGGGCACCATATCAAACAAAGTTGATTGACCTGAACCTTCTAAATCCAGAAGAGAAAAAGTGGTTGAACTCCTATCATTCGAAGTGTAGAGATATTTTGGCACCATATTTGGATGAAGCTGAAAGTGCATGGCTGAAGAAAGCGACCGAACCTGTAATCGTGTGA 1977 0.4067 MAAETLSALRSLMASHSPPLHALVVPSEDYHQSEYVSARDKRRAFVSGFTGSAGLALITKDEALLWTDGRYFLQAEQQLSAQWKLMRLAEDPPVDIWMADNLPKDAAIGVDPWCISIDTAQRWERSFAKKQQKLVQTTKNLVDEVWATRPPEEINAVVVQPLKFAGRSVTDKLKDLRKKLAQEHARGIIFTALDEVAWLYNIRGKDVAYCPVVHAFAIVTSNHAFIYVDKRKVSNEVKTHLEENGIEIKEYTEVSLDTALLATDELDHVSTAKGSLAEVTKESENLPSETNKIGNGRHQTGEKSSNLIWADPGSCCYALYSKLNPDTVHLQQSPLALPKALKNTVELDGLRKAHIRDGAAVVQYLVWLDKKMQDFYGASGYFLEENTVKKEKHLQSLKLTEVTVSDKLEEFRASKEHFRGLSFPTISSVGPNAAIIHYSPEAETCAELDPDKIYLFDSGAQYLDGTTDITRTVHFGRPSDHEKACYTAVLKGHIALGNAIFPNGTNGHALDILARIPLWKYGLDYRHGTGHGIGSYLNVHEGPHLISFRTRNVPLQSSMTVTDEPGYYEDGAFGIRLENVLVINKADAKYNFGDKGYLSFEHITWAPYQTKLIDLNLLNPEEKKWLNSYHSKCRDILAPYLDEAESAWLKKATEPVIV 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00716 658 MobiDBLite consensus disorder prediction 282 301 - -
Tsu05g00716 658 Gene3D - 147 337 IPR029149 -
Tsu05g00716 658 SUPERFAMILY Creatinase/aminopeptidase 344 622 IPR036005 -
Tsu05g00716 658 SUPERFAMILY Creatinase/prolidase N-terminal domain 42 132 IPR029149 -
Tsu05g00716 658 Pfam Creatinase/Prolidase N-terminal domain 149 346 - -
Tsu05g00716 658 Pfam C-terminal region of peptidase_M24 597 655 IPR032416 -
Tsu05g00716 658 Pfam Creatinase/Prolidase N-terminal domain 6 142 IPR000587 GO:0016787
Tsu05g00716 658 Gene3D Creatinase/methionine aminopeptidase superfamily 340 658 IPR036005 -
Tsu05g00716 658 Pfam Metallopeptidase family M24 350 584 IPR000994 -
Tsu05g00716 658 PANTHER XAA-PRO AMINOPEPTIDASE 1 3 657 - -
Tsu05g00716 658 ProSitePatterns Aminopeptidase P and proline dipeptidase signature. 527 539 IPR001131 -
Tsu05g00716 658 CDD APP 349 593 IPR033740 GO:0070006
Tsu05g00716 658 Gene3D - 1 146 IPR029149 -
Tsu05g00716 658 PANTHER AMINOPEPTIDASE P1 3 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00716 Tsu-Chr5 6030843 6038105 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00716 K01262 - gmx:100803268 1125.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00716 05 6030843 6038105 Tsu05g00716 05 6030843 6038105 ECH