Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00712 ATGGTGACTCCAAAAATTCATGCAGCCATACTAGCCAGTCCTGGCATGGGACACCTAATTCCCACCATGGAATTAGCCAAACGTCTTGTCACTCACCATGGTTTTGAAGTCACAATCTTTGCCGTCACCGCCACCACCACGGCCGCCACCGACAATTCATCAGactcaaacacaaaaaaatcaaatatacttCAACAAACAACCAACCTTAATAGCCTCAAGTCCCTCAACATCATTGTAACACCACCTGTCGATGTCTCCGACAAACTTGACCCAAACAAACCACACATAGCTCAAAGAATTGTTTTAACTATGATTGAATCTCTTCCTTTTATTCGATCTCATATATTATCCATGAAATTTCCTCCATCAGTTCTTATTGTCGACATTTTTGGTTTTATAGCTTTACCCATGGCACGTGATCTTCACATGTCTAGTTACGTTTTCTTTTCTACAAATGCTTGGTTCACTGCTGTTAGCATTTACATGCCTTTCATCACAAATGAAGCATTATTAAGACACACTAATAATCACGAACCGCTTTTGATTCCGGGTTGCAAACCGGTTCAGTTCGAGGATACCCTAGAAATGTTATTTCTTCGGTATGATGAGGGTGTTGTTAACATGACAAGGGAGATACTATCCGTTGATGGGATTTTGATGAACACGTGGCAAGATCTGGAGCCAGCAGCTACTAAGGCTGTTATTGAACAAACGATTTTAGGACAGTTTACTAAAGGACCAGTGTATTCTGTTGGACCGCTTGTGAGAAATGTAGAACCGGAGGAGAAGAGGGATGGtgagaatttaattttaagttggCTTGACGGACAACCGGCTGAGTCAGTTATTTTCTTGTCCTTCGGAAGTGGTGGGACGATATCAAAATCTCAGATGACGGAGTTGGCTTATGGTTTAGAGTTGAGTAAGCAGAGATTTATTTGGGTGGTGCGGAAGCCCACCGAGGGGGATGCATCTGCAGCATTTTTTGAAGCGAAGGGTTCCAATGGGTTACTGATAATTAATTACTTGCCACAGGGGTTTGTGAGTAGGACAAAGGATGTGGGGCTTTGTGTCACCGAGTGGGCCCCACAGGCTGAGATTTTGAAACATCCCGCGATAGGTGGATTTGTGACGCACTGCGGTTGGAATTCTGTGCTTGAGAGTATTGTTAATGGAGTTCCAATGGTTGCGTGGCCACTTTATGCAGAGCAGAAGATGAATGCCACTATGTTGTCAAAGGAGCTAGGGGTAGCGGTGAAGGCGACTGCGACAGAGGAGGGAGGAGTTGTTTGTAGGAAAAAGATAGCAGAGCTAATTCATAGAGTGATGGTGGATGAAGAAGGTATAGCCATGAGGGTTAAAGTTAAGGCTTATAGGCTAAGTGGAGAACAAGCTTTGTCTGCATTTGGTTCTTCTCATGAGTCCCTTTGTCAGATGGCAAAAGATTGTGTACTTTATATGCACCCGCGTTCTGAGGCAAAAGCACGGGGTGCTTAG 1500 0.4307 MVTPKIHAAILASPGMGHLIPTMELAKRLVTHHGFEVTIFAVTATTTAATDNSSDSNTKKSNILQQTTNLNSLKSLNIIVTPPVDVSDKLDPNKPHIAQRIVLTMIESLPFIRSHILSMKFPPSVLIVDIFGFIALPMARDLHMSSYVFFSTNAWFTAVSIYMPFITNEALLRHTNNHEPLLIPGCKPVQFEDTLEMLFLRYDEGVVNMTREILSVDGILMNTWQDLEPAATKAVIEQTILGQFTKGPVYSVGPLVRNVEPEEKRDGENLILSWLDGQPAESVIFLSFGSGGTISKSQMTELAYGLELSKQRFIWVVRKPTEGDASAAFFEAKGSNGLLIINYLPQGFVSRTKDVGLCVTEWAPQAEILKHPAIGGFVTHCGWNSVLESIVNGVPMVAWPLYAEQKMNATMLSKELGVAVKATATEEGGVVCRKKIAELIHRVMVDEEGIAMRVKVKAYRLSGEQALSAFGSSHESLCQMAKDCVLYMHPRSEAKARGA 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00712 499 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 280 421 IPR002213 GO:0008194
Tsu05g00712 499 PANTHER UDP-GLYCOSYLTRANSFERASE 72E1 3 486 - -
Tsu05g00712 499 CDD GT1_Gtf-like 7 466 IPR002213 GO:0008194
Tsu05g00712 499 Gene3D Glycogen Phosphorylase B; 269 468 - -
Tsu05g00712 499 ProSitePatterns UDP-glycosyltransferases signature. 362 405 IPR035595 -
Tsu05g00712 499 Gene3D Glycogen Phosphorylase B; 7 473 - -
Tsu05g00712 499 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00712 Tsu-Chr5 6005155 6006654 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00712 5 488 Glycosyltransferase AT5G26310 44.625 1.44e-146 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00712 K12356 - gmx:100781979 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00712 05 6005155 6006654 Tsu05g00712 05 6005155 6006654 ECH