Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00708 ATGAGACTGGTTCGAACCCAAAAACATAGCACAAACACTCTTCTTCCATCCAAATCATCATTTACAACTCCCACTTCTCAAACCATGAAAACAACAATACAGATTTGTGGCGTATCTCTTTCGCTCATTCTTATCAACCTAGCCGCTATAATGGAGCGCGCAGATGAAAATCTTCTTCCAGCAGTCTACAAAGAAGTTAGTGAAGCATTCAATGCAGGACCGTCCGATTTAGGTTACCTCACATTCATAAGGAACTTTGTTCAAGGAATATCATCTCCACTAGCCGGTATACTTGTTATTAACTATGATAGACCAACAATTCTTGCTATGGGAACTTTTTGTTGGGCATTATCCACTGCTGCTGTTAGTGCTTGCAACGGTTTTATGCAGGTTGCGTTTTGGAGAGCGATAAATGGATTTGGTTTGGCAATTGTGATTCCAGCATTGCAGTCTTTCATTGCTGATAGCTATAAGGAAGGTGTGAGAGGAGCTGGATTTGGATTACTAAGCTTTGTCGGTACTGTAGGTGGAATTGGAGGTGGTGTTATGGCTACTGTCATGGCTGGTCAGACGTTTTGGGGAATACAAGGATGGAGATGTGCCTTTGTTTTGATGGCAAGTTTGAGTGCGTTCATTGGATTCCTTGTTTTGCTATATGTCGATGatccaagaaaaagaatttcCGGCACTCAAAATGCTAGCGATAGCTcagaaaaGGATGGTTCTCTCTATAATGGCAATGCTAGTGTGACATCAATTTGGAGGCGCTCATGGGCAGCCACTAAATCTGTGATCAAAGTGCCAACATTTCAAATAATTGTCTTACAAGGCATTATTGGGTCATTACCATGGACTGCCATGGTGTTCTTCACGATGTGGTTCGAACTAATTGGTTTTGATAATAACACTTCAGCAACTCTCCTCAGTCTTTTTGCTATTGGATGTGCAATCGGCTCATTCGTAGGAGGATCAATAGCTGATCGAATGTCACAAACCTATCCATATTCAGCTCGAATTATGTGTGCGCAATTTAGTGCCTTTATGGGCATTCCATTCTCATGGTTTCTTCTTAAGATCATACCTCAATCAGTAACTAGTTTTTTTACATATTCGGTCACACTCTTTCTTATGGGACTCACTATAAGCTGGAATGGTACGGCTGCAAATGCACCAATGTTCGCTGAGGTTGTCCCGGTCAAACACAGAACAATGATTTATGCATTCGATAGAGCTTTTGAAGGCTCATTCTCTTCTGTTGCAGCTCCTTTGGTTGGCATTCTTGCAGAGAAAATGTTCGGCTACAATTCAAAATCTGTTGATCCTCTCAATGGGTCTCCGGCAGAGGCACTTGCCTTGTCAAAGGGACTTCTTTCAATGATGGCAATTCCATTTGGACTGTGTTGTTTGTGCTACACACCtttgtattatatatttaagaaGGACCGTGAAAATGCTAGAATGCAAGCCGTGAAAGAAGAGGAGATGATGTGA 1491 0.4098 MRLVRTQKHSTNTLLPSKSSFTTPTSQTMKTTIQICGVSLSLILINLAAIMERADENLLPAVYKEVSEAFNAGPSDLGYLTFIRNFVQGISSPLAGILVINYDRPTILAMGTFCWALSTAAVSACNGFMQVAFWRAINGFGLAIVIPALQSFIADSYKEGVRGAGFGLLSFVGTVGGIGGGVMATVMAGQTFWGIQGWRCAFVLMASLSAFIGFLVLLYVDDPRKRISGTQNASDSSEKDGSLYNGNASVTSIWRRSWAATKSVIKVPTFQIIVLQGIIGSLPWTAMVFFTMWFELIGFDNNTSATLLSLFAIGCAIGSFVGGSIADRMSQTYPYSARIMCAQFSAFMGIPFSWFLLKIIPQSVTSFFTYSVTLFLMGLTISWNGTAANAPMFAEVVPVKHRTMIYAFDRAFEGSFSSVAAPLVGILAEKMFGYNSKSVDPLNGSPAEALALSKGLLSMMAIPFGLCCLCYTPLYYIFKKDRENARMQAVKEEEMM 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00708 496 CDD MFS_spinster_like 42 471 IPR044770 -
Tsu05g00708 496 MobiDBLite consensus disorder prediction 1 25 - -
Tsu05g00708 496 PANTHER SPINSTER 30 496 IPR044770 -
Tsu05g00708 496 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 30 496 - -
Tsu05g00708 496 SUPERFAMILY MFS general substrate transporter 40 492 IPR036259 -
Tsu05g00708 496 Pfam Major Facilitator Superfamily 47 352 IPR011701 GO:0022857|GO:0055085
Tsu05g00708 496 Gene3D MFS general substrate transporter like domains 38 229 IPR036259 -
Tsu05g00708 496 Gene3D MFS general substrate transporter like domains 267 494 IPR036259 -
Tsu05g00708 496 ProSiteProfiles Major facilitator superfamily (MFS) profile. 41 483 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00708 Tsu-Chr5 5980355 5984092 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00708 - - gmx:100812646 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00708 05 5980355 5984092 Tsu05g00708 05 5980355 5984092 ECH