Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00705 ATGGGATGTCAGTCCAGCAAGGAGACTGGTACCAATACTGATGTCCAAAGCCCAACGCCGATTAAAATGGGCGCACATTCTCTTTATGCCGCCGATTTAAGCTCTTATGAAGCTGCGTGTGTTGATGATCCGAACTTGCGATTATTTGATGCTACCATTCAGGAGCGGACTAACAGGGTGATCAACTCTCTTGCTCAAGGGATTGAGGTTCGTTCTATATCACTTGAGTCACTAGGCGAAGTTACCGGCAGTCTTCTTGACATGAACCAGGAAGTTGTCAAAGTTATTCTTGAGTGTAAGCAAGATATATGGAACAAGAAGGATCGCGACTTGTTCGCGTTGGTGGAGGATTTTTTTGATAGTAGTCTCCAGACATTGGAGTTTTGTAATGCTCTTGAGAAATGCTTGAAACGAGCACGCGAAAAACTTGTTGCGGTTAATTCTGCAATGACTTGTTTTGACGAAGAGGTTCAAAATGGAGTTGAAGGGTCGACTTATTTGAAGACAATGAAAGGACTCAAGGATTTTAAGGAAACCGGGGACCCTTTTACGGAAGAGTTTAATTCATTGTTTCAGAAGGTTTATACTCAACAATCTTCAATGCTGAAGAAATTGCTGATTGGAAAGCAAAAACTTGATAAGAAACTTAAATCTCTCAAGACATTGAAGAGGGTGTCAAGTGTTATTTTCGTAGCTGCTTTTGTTGCTGTGTTGATTTTCTCGGTAGTCGCAGCTGCAATTGCTGCACCACCTGTTGTAACGGCTTTGGCCGGAGCGTTGGCTGTTCCAATAGGTTCAGTTGGAAAATGGTGTAACTCACTTTTTAAGAAATACGAAACAGCTTTAAAAGGCCAAAGAGAAGTAATCAGTTCAATGCAGGTTGGTACGCGTATTGCATTGGTGGATATGAATAACATTCGGGTGTGTATCGATCAATTGGAAATAAAGATCGAATCCATGGTGCAAGTTGCTGATTTTGCTCTTGGAAACGAGGATGCTGTAAAGCTTGCGATCGATGAGATTAGgaataaaatagaaacttttGCGGAGATTATTGAGAGTTTGAGTGTGCAAGCTGATAAATGTAGTCGACAGACTATGAAAGCAAGGACAGTAGTTGTacaaaagataattaaatactcTAAGTTAACAgttgattga 1161 0.3988 MGCQSSKETGTNTDVQSPTPIKMGAHSLYAADLSSYEAACVDDPNLRLFDATIQERTNRVINSLAQGIEVRSISLESLGEVTGSLLDMNQEVVKVILECKQDIWNKKDRDLFALVEDFFDSSLQTLEFCNALEKCLKRAREKLVAVNSAMTCFDEEVQNGVEGSTYLKTMKGLKDFKETGDPFTEEFNSLFQKVYTQQSSMLKKLLIGKQKLDKKLKSLKTLKRVSSVIFVAAFVAVLIFSVVAAAIAAPPVVTALAGALAVPIGSVGKWCNSLFKKYETALKGQREVISSMQVGTRIALVDMNNIRVCIDQLEIKIESMVQVADFALGNEDAVKLAIDEIRNKIETFAEIIESLSVQADKCSRQTMKARTVVVQKIIKYSKLTVD 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00705 386 PANTHER UPF0496 PROTEIN 3-RELATED 1 380 IPR007749 -
Tsu05g00705 386 PANTHER UPF0496 PLANT-LIKE PROTEIN 1 380 - -
Tsu05g00705 386 Coils Coil 338 358 - -
Tsu05g00705 386 Pfam Protein of unknown function (DUF677) 46 377 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00705 Tsu-Chr5 5946604 5948514 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00705 - - gmx:100819451 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00705 05 5946604 5948514 Tsu04g03361 04 42804465 42805592 ECH
Tsu05g00705 05 5946604 5948514 Tsu05g00705 05 5946604 5948514 ECH