Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00702 ATGGTAACATTAAAATCCATTCTCTCCACCATTTCTCATACACACCATTTCTATCTTCAAACTCTCTTATTGTTATTTCTCTTCTCTACTAATCATGTCTCGTGCACAACCACtgtcaccaccaccaccacgcAATGCTTCAAACAAGCGCCAAAATTCTACAACTCCCCAAACTGTCCCACTATAACCTCCCTCACATGCTCTGATGAAGCCGTCCATGTAGCAATGACACTAGACATCAAATACCTCCGTGGCTCCATGGCGGCAATTCTCTCCGTTCTTCAACACTCTTCATGTCCAGAAAACACCTTCTTCCACTTCGTAACCGCCGCGTCAAAAACAACCTCCACCATCATCCTCAACACTACACTAACTAACTCATTCCCTTATCTAAATTTCCAAATCTACCCTTTCCACGACGACGTCGTTTTAGGTTTAATTTCAACTTCAATCCGTTCCGCACTCGATTGTCCTCTCAACTACGCGCGAAATTACATGTCTAACCTTCTTCCAAATTGCGTTCGTAAAATCGTTTACCTTGATTCCGATCTAATTCTTGTTGATGACATTGCAAAACTTGCTAAAACGAATCTCGGAAACGACGCCGTTTTAGCTGCGCCGGAGTATTGTAACGCCAATTTTAGCAACTACTTTACACCTACGTTTTGGTCGAATCCGTCGCTATCGTTAACGTTTGCGAGTCGGAAGGCTTGTTATTTTAACACCGGAGTTATGGTGATTGATTTGGAGCGGTGGAGGATCGGAGATTATACGACGAAGATTACTGAATGGATGGAGCTTCAGAAGAGAATGAGGATTTATGAGCTTGGTTCTTTGCCGCCGTTTTTGCTTGTTTTCGCCGGAAAAATTGTTCCCGTTGATCATCGGTGGAATCAGCATGGGCTTGGTGGTGATAATTTTCGTGGGCTTTGTAGAGACTTACATCCGGGCCCGGTGAGTTTATTGCATTGGAGTGGGAAAGGTAAACCGTGGGCCAGGCTTGATGCTAATCGTCCTTGTCCATTGGATGCTTTGTGGGCCCCATATGACCTTCTTGAAACACCCTTTGCTCTTGAGGCCTAA 1083 0.434 MVTLKSILSTISHTHHFYLQTLLLLFLFSTNHVSCTTTVTTTTTQCFKQAPKFYNSPNCPTITSLTCSDEAVHVAMTLDIKYLRGSMAAILSVLQHSSCPENTFFHFVTAASKTTSTIILNTTLTNSFPYLNFQIYPFHDDVVLGLISTSIRSALDCPLNYARNYMSNLLPNCVRKIVYLDSDLILVDDIAKLAKTNLGNDAVLAAPEYCNANFSNYFTPTFWSNPSLSLTFASRKACYFNTGVMVIDLERWRIGDYTTKITEWMELQKRMRIYELGSLPPFLLVFAGKIVPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWARLDANRPCPLDALWAPYDLLETPFALEA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00702 360 Pfam Glycosyl transferase family 8 73 333 IPR002495 GO:0016757
Tsu05g00702 360 SUPERFAMILY Nucleotide-diphospho-sugar transferases 72 351 IPR029044 -
Tsu05g00702 360 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 73 339 IPR029044 -
Tsu05g00702 360 PANTHER HEXOSYLTRANSFERASE 13 360 - -
Tsu05g00702 360 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 13 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00702 Tsu-Chr5 5920213 5921941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00702 40 360 Glycosyltransferase AT1G19300 73.494 6.90e-176 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00702 K20893 - gmx:100783054 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00702 05 5920213 5921941 Tsu05g00702 05 5920213 5921941 ECH