Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00698 ATGTCGATTCCCTTTCTCCGTGAATTCAACAGATTAACATTCCAATTtcacattcaaattcaaattcgttTCTATACTCGTCGTCGTGACCCTTTTCCCACCAAAATTTGCCACTACTTAAACCGTGCTAAACTCATCGATTCAATTCGTCTTTCTTTACGCTCCAAAAACCCTAATTCCACACTCCCAAATCTCATTAACCACCGTTTATTCGACTCTTTTGTTCTCACTCATGCACTTCGTTCTGCACCTGGTGCAAATTCTGCACTTTCTCTTATTAACACCATTGAGAATGcaaaaagttccaatttttcaCATACCCAGAATACCCTCCATGCCCTTGCCACTGTTCTTGCAAAATCCGGTCGATGCGATGAGCTCAAATCGCTTATTGATGATATCCGAAGTAAACGGTTTGGCAATGTTAAGATTAGTTTTATGAATCTAATTAAGTGGTATGCTGAAGCTAAAGATATTGATTCTGTTATCGAGATTTGGGATCGGTATAGAGTTGAAAGTAAAATAGTATGTACTGAATCTTATAACATTGTTATGGCTCTTTATGTTGAAATGGGAAAGGATTTTGAGGCTGTTGGAGTTTTTTGTAAAATGGTTGATGATGGGTCGGTTCCGAATTGTAGAAGTTATAGTATAATAATTGAGCATCTTGTGAAATGTAGGAAGTTTTTCGAAGCTATTGAGGTTTTTAATTTGTTGCCTTTGATGAGGATTAAACGTACTTTGAAGCAGTATTCGGTTTTAATTGATGGTTTGGTTGGTAGTAAAATGTTTGATGAAGTTGGTGTTTTAGTTAATGAGATGCAAGTTGATGGAATATTACCTAGTCGAACGATCAGTTTGTTGTTGCAGCAGGTAAAGGAGGAAGGATTTCTTAAGGATGTAGATGAATTGTTTGGAGAAATTTGTCCGGATGAAAGAATCAAGAATGTAAGATTTTCTATTGATAGCAGTGACGAGGATGAGGATGAAAATGAGGATGAGGGTgaaaatgagaatgagaatgaTGCTTCGCAATGTGATCATGTAGATGGGATATGCTTAAAACCGTGGATAGATCCGCGGTCTTTGGCTAGTGCCTTACAGAATTGGAGTCCTGATGAGGTATCAGCACTAGAGGATGCAAAGTTTGTTTGGACAACTAGGTTGGTATGCAAGATACTTAGAAGTTTCAATTCACCGGATACTGCATGGAATTTCTTTTGCTGGGTTGCGGATCAACCTGGATTTACTCATAATATATACACGGTGCAAAGAATCATGACCCTTCTAGCTCGCCATGGACGTACTGAATTAGTTGATAAACTCATATATAAGATCAGAATAGAGGGAATGAGACTACCATTCAGTACCATAAGGTTAATCATTGACTTTTATGGGATTTCAAAACATGCTGATGCTGCTCTGAAGGTTTTCAACGATGATCGAATACTTTGTGGGTCTATATCGAAAGTTAACTTGATGCTTTTGTATTCTTCTCTTTTAAGAACATTAACCAAGTGTGGTAGGGATTCTGATGCCCTGGAAATGGTTGATGAGATGATTTTAAATGGTATTTGCCCAGATATCCAAACATTTTCAGGTCTAATGCAATATTTTTCACAAAGTGGAGACATTAAAACTGTGCACAAACTCTTTACGATGGTCAAGCAGAGCGGTTTTGAGCCAGATGCGTATCTGTTTAAGGTGCTAATCGAAGGTTATTGCAAGTCGAAAAGAGCTGCACTGGCTTGGAAGCTATTTGAAGACATGAAGAATTCAGGTTTGATGCCTGATTCTTCCACCAAAGAGTTGCTTGTGAAGAGCCTTTGGAGAGAAGGGAGACGGAGAGAAGCCGCAGCAGTTGAAGAGAGCTGTGGGGAAGTGAATGTGGTCCTTCCACTTGCATTGCCTGGTCATGTATGGACCATCAGCTCTGCAGATCTCACAAGAGTTCATAACATTTATTCTAATTGTTTTGCTTCAAAAGGTGCCTAG 1995 0.3789 MSIPFLREFNRLTFQFHIQIQIRFYTRRRDPFPTKICHYLNRAKLIDSIRLSLRSKNPNSTLPNLINHRLFDSFVLTHALRSAPGANSALSLINTIENAKSSNFSHTQNTLHALATVLAKSGRCDELKSLIDDIRSKRFGNVKISFMNLIKWYAEAKDIDSVIEIWDRYRVESKIVCTESYNIVMALYVEMGKDFEAVGVFCKMVDDGSVPNCRSYSIIIEHLVKCRKFFEAIEVFNLLPLMRIKRTLKQYSVLIDGLVGSKMFDEVGVLVNEMQVDGILPSRTISLLLQQVKEEGFLKDVDELFGEICPDERIKNVRFSIDSSDEDEDENEDEGENENENDASQCDHVDGICLKPWIDPRSLASALQNWSPDEVSALEDAKFVWTTRLVCKILRSFNSPDTAWNFFCWVADQPGFTHNIYTVQRIMTLLARHGRTELVDKLIYKIRIEGMRLPFSTIRLIIDFYGISKHADAALKVFNDDRILCGSISKVNLMLLYSSLLRTLTKCGRDSDALEMVDEMILNGICPDIQTFSGLMQYFSQSGDIKTVHKLFTMVKQSGFEPDAYLFKVLIEGYCKSKRAALAWKLFEDMKNSGLMPDSSTKELLVKSLWREGRRREAAAVEESCGEVNVVLPLALPGHVWTISSADLTRVHNIYSNCFASKGA 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00698 664 MobiDBLite consensus disorder prediction 323 340 - -
Tsu05g00698 664 Gene3D Tetratricopeptide repeat domain 364 490 IPR011990 GO:0005515
Tsu05g00698 664 Gene3D Tetratricopeptide repeat domain 491 634 IPR011990 GO:0005515
Tsu05g00698 664 Gene3D Tetratricopeptide repeat domain 72 190 IPR011990 GO:0005515
Tsu05g00698 664 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 247 281 IPR002885 -
Tsu05g00698 664 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 563 597 IPR002885 -
Tsu05g00698 664 Gene3D Tetratricopeptide repeat domain 195 354 IPR011990 GO:0005515
Tsu05g00698 664 Pfam PPR repeat 251 279 IPR002885 -
Tsu05g00698 664 Pfam PPR repeat 180 208 IPR002885 -
Tsu05g00698 664 Pfam PPR repeat 215 238 IPR002885 -
Tsu05g00698 664 Pfam PPR repeat 497 525 IPR002885 -
Tsu05g00698 664 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 528 562 IPR002885 -
Tsu05g00698 664 PANTHER OS01G0167750 PROTEIN 17 661 IPR044175 -
Tsu05g00698 664 TIGRFAM PPR: pentatricopeptide repeat domain 180 213 IPR002885 -
Tsu05g00698 664 TIGRFAM PPR: pentatricopeptide repeat domain 567 598 IPR002885 -
Tsu05g00698 664 TIGRFAM PPR: pentatricopeptide repeat domain 251 282 IPR002885 -
Tsu05g00698 664 TIGRFAM PPR: pentatricopeptide repeat domain 497 529 IPR002885 -
Tsu05g00698 664 Pfam PPR repeat family 569 609 IPR002885 -
Tsu05g00698 664 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 177 211 IPR002885 -
Tsu05g00698 664 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 493 527 IPR002885 -
Tsu05g00698 664 MobiDBLite consensus disorder prediction 320 346 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00698 500 628 Glycosyltransferase AT1G05670 27.907 1.13e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00698 - - cam:101514749 1116.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00698 05 5874462 5876478 Tsu05g00698 05 5874462 5876478 ECH