Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00481 atggcTACAGCTACGAATTTGCTACAAACATTAGGAAACTTAGAGAAGGATTCATTCATACCCCTTCTCTCAAACCTAATCGGTGAATCAAGACACGTTCAGAACAATCCACCAGAACTCATTCCTGAAGAAGACAGAGTAGTCAAACATGTCTTAAACTCTCTCTCACCGTTAAGCACCGCCACCGGCGGTGGTCCCTTAATCATCAACCATGTCACTTATTTCCCCGGCAGAGGTAATCTCATCGTCGAGTACCCTGGAACCGTTCCTGGCAAGATCCTTTCCTTTGTTGGTTGCCACATGGATGTCGTCACCGCAAATCCCAATGATTGGGATTTTGATCCGTTTACGTTGAGCATCGATGGCGATAAACTTAGGGGACGAGGAACTACTGACTGTTTGGGACATGTTGCACTTGTTACTGAATTGATGAAGAAGCTTGCTCAAACTAAGCCCAATTTGAAATCAACTGTTGTTGCTGTTTTTATAGCTAATGAAGAGAATTCTGCTATTACTGGTGTTGGTGTTGATGCACTTGTTCAAGATGGGTTACTCAATAAGCTAAAGGATGGTCCTTTGTTTTGGATCGATACGGCTGATAAACAACCTTGTGTTGGTACTGGTGGTATGATACCTTGGAAACTTCATGTCACTGGGAAGCTCTTTCATAGTGGATTAGCTCACAAGGCTATAAATCCACTTGAGCTAGCCATGGATGCGATAAAGGAAATCCAGTTGAAATTTTACAAGGACTTCCCACCTCATCCTCAGGAGGAAGTTTATGGGTTTGCAACCCCTTCCACCATGAAACCAACACAATGGAGTTATCCTGGAGGTGGAATCAATCAAATTCCAGGGGAATGTACCATTTCAGGAGATGTCAGATTAACTCCATTCTACAATGTGAAGGACGTAATAAAGAAGCTGCAAGAATATGTGGACGACATTAATGAGAATATACAGAAGCTAGAAACTCGGGGTCCAGTTTCCAAATATGTCCTGTCTGATGAAAACTTAAGGGGGAGGTGGGGCTTTTTTATCCTTGTTAAATTGGCTTGGATAATAAATTCAGCTTTGACTTCTCTAGATTTAGTGTTAACAAAAGAGtttgttttacttttgaatatttaa 1131 0.4103 MATATNLLQTLGNLEKDSFIPLLSNLIGESRHVQNNPPELIPEEDRVVKHVLNSLSPLSTATGGGPLIINHVTYFPGRGNLIVEYPGTVPGKILSFVGCHMDVVTANPNDWDFDPFTLSIDGDKLRGRGTTDCLGHVALVTELMKKLAQTKPNLKSTVVAVFIANEENSAITGVGVDALVQDGLLNKLKDGPLFWIDTADKQPCVGTGGMIPWKLHVTGKLFHSGLAHKAINPLELAMDAIKEIQLKFYKDFPPHPQEEVYGFATPSTMKPTQWSYPGGGINQIPGECTISGDVRLTPFYNVKDVIKKLQEYVDDINENIQKLETRGPVSKYVLSDENLRGRWGFFILVKLAWIINSALTSLDLVLTKEFVLLLNI 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00481 376 Gene3D Zn peptidases 12 199 - -
Tsu05g00481 376 SUPERFAMILY Zn-dependent exopeptidases 38 268 - -
Tsu05g00481 376 Pfam Peptidase family M20/M25/M40 97 194 IPR002933 GO:0016787
Tsu05g00481 376 Coils Coil 306 326 - -
Tsu05g00481 376 SUPERFAMILY Bacterial exopeptidase dimerisation domain 209 319 IPR036264 -
Tsu05g00481 376 Pfam Peptidase dimerisation domain 206 318 IPR011650 -
Tsu05g00481 376 PANTHER ACETYLORNITHINE DEACETYLASE 8 343 - -
Tsu05g00481 376 Gene3D - 209 325 - -
Tsu05g00481 376 PANTHER - 8 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00481 Tsu-Chr5 3747297 3749981 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00481 K01438 - gmx:100814676 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00481 05 3747297 3749981 Tsu05g00481 05 3747297 3749981 ECH