Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00473 ATGAGTGGCATAGCGTTGACACCCGCAGCAGTTTTCAATCCCATAAtcccatcttcatcttcttcttctttttcatctctCAAATCTCACAAATTCATCAAAACCAGAACCAGACTCACACAATTCAACAACGCTATTTCAATTTCCTCAGACCCATTCCTTCTCGACCTCGCTGAAACCTTAGAAGACTCCGTCCCTACACCACAACCTCTCCAGAATCTTCGAGAAGCTTCCTCAGAATCACTTCTCTCAACTCCATGGCCTTCTCGAAGAGACGAACCCTTTCGTTTCACAGACCTTTCTTTCCTTCGCTCTTCTCATATCCTCCCTACCCCAATCCCAACCACAACAACCACCGTCACACCATTCTCCGATGATCAATTCCCATGCCACGTCAGCTTTATCGACGGTCATTTTATAAACTCAATGTCGAAAAATTTGGAATTTCCTGATGGGGTTTACGTTGGTAGTTTATCGAATTTGAGTGGTGAAGTTGCTGAAAGGGTTTTAGAATTGGTTTCTGGATTGGATGGTGGTGATTTGTTTTGGTCGATTAATGGTATGGGTGCTCCTGATTTGATGGTGGTTTATGTGCCGGAGGGTGTTCGGGTTGAAAATCCGGTTCATTTGGGTTATTTATCGTTGCAGGGTAGTAAGGAAGGTTCGAAGGATTTGTATATTTCGAATCCGAGGGTTTTAGTTGTGGTGGAGAAAGGTGGAGAGGTTGATATAATTGAAGAGTTTTCtaatgatgatgagaatgaGAATGGGTTTTATTGGAGTAATGCTGTTTTGGAGGTTGTCATTGGGGAAGGTGGTAAGGTTAGACATTCTTATATTCAGACTCAGTCATTGGTTGCTGCACATATCAAATGGACTTCCGTTCGACAGGAATCATCTAGTACATATGAGCTTACAGAGGTAAGTACAGGAGGCAAACTAGGAAGGCACAATCTTCATATCAAACAACTAGGTCCAGACACGGTGACAGAGTTATCAACTCTACACTTGTCTGTTGGTAATCAAACACAGGATCTTCACAGTAGTCTTGTATTGGATCATCCAAGGGGCTTTTCCCGTCAGCTTCATAAGTGCATTGTAGCTCATTCACAGGGACAAGCAGTTTTTGATGGAAACGTTAAGGTTAACAGGTATGCTCAGCAGACAGATGCAGGACAATTAACAAGAAGCCTTCTTCTTGAACCTCGTGCAACTGTAAATGTTAAACCAAATCTCCAAATCATCGCTGATGACGTAAAGTGTTCCCATGGAGCTGCAATAAGTGACTTGGAACAGAGCCAACTTCTGTATTTCCAAGCACGCGGCATTGATTCAGAAACAGCTAGAAGGGTTCTAATTTTTGCCTTTGGAGGGGAAATCATAGATAAGTTTCCTTATTCTTCCGTTAGAGATAAAGTACGAAGTCAGATTAAAAGTTTATTGGATCCATCTCCTAAATTAGCACCATTATAG 1473 0.4087 MSGIALTPAAVFNPIIPSSSSSSFSSLKSHKFIKTRTRLTQFNNAISISSDPFLLDLAETLEDSVPTPQPLQNLREASSESLLSTPWPSRRDEPFRFTDLSFLRSSHILPTPIPTTTTTVTPFSDDQFPCHVSFIDGHFINSMSKNLEFPDGVYVGSLSNLSGEVAERVLELVSGLDGGDLFWSINGMGAPDLMVVYVPEGVRVENPVHLGYLSLQGSKEGSKDLYISNPRVLVVVEKGGEVDIIEEFSNDDENENGFYWSNAVLEVVIGEGGKVRHSYIQTQSLVAAHIKWTSVRQESSSTYELTEVSTGGKLGRHNLHIKQLGPDTVTELSTLHLSVGNQTQDLHSSLVLDHPRGFSRQLHKCIVAHSQGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEQSQLLYFQARGIDSETARRVLIFAFGGEIIDKFPYSSVRDKVRSQIKSLLDPSPKLAPL 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00473 490 MobiDBLite consensus disorder prediction 65 86 - -
Tsu05g00473 490 Pfam SUF system FeS cluster assembly, SufBD 228 456 IPR000825 GO:0016226
Tsu05g00473 490 Pfam SufBD protein N-terminal region 69 210 IPR045595 -
Tsu05g00473 490 PANTHER PROTEIN ABCI7, CHLOROPLASTIC 27 484 IPR011542 GO:0016226
Tsu05g00473 490 SUPERFAMILY Stabilizer of iron transporter SufD 64 482 IPR037284 -
Tsu05g00473 490 TIGRFAM sufD: FeS assembly protein SufD 193 472 IPR011542 GO:0016226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00473 K09015 - mnt:21406068 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00473 05 3668720 3672305 Tsu05g00473 05 3668720 3672305 ECH