Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00472 ATGGCACTTAGGATGTGGGCTTCTTCAACTGCCAATGCTCTCAAACTCTCTTCTTCTGCTTCAAAATTACATCTCTCCCCTCCCTTTTCCATTTCCAGATGTTTCTCTAGTGTCTTGGATGGACTCAAGTACACATCTTCACATGAATGGGTTAAGCATGAAGGCTCAGTGGCCACAATTGGTATCTCTGACCATGCTCAGGACCATCTTGGAGAAGTTGTGTTTGTTGAGCTTCCAGAGCCTGGGGGTTCAGTTACAAAGGGTAACGGTTTCGGAGCAGTTGAAAGTGTTAAGGCAACAAGTGATGTAAACTCTCCAATTTCTGGTGAGATTGTTGAGGTTAATGATAAGCTCACTGGAAAACCTGGCCTGATCAACTCAAGCCCATATGAAGATGGATGGATGATCAAAATAAAGCCAAGTGATCCATCTGAATTAGAATCATTGTTGGGTGCAAAGGAGTACACAAAATTTTGTGAAGAAGAAGATGCTGCACattga 501 0.4271 MALRMWASSTANALKLSSSASKLHLSPPFSISRCFSSVLDGLKYTSSHEWVKHEGSVATIGISDHAQDHLGEVVFVELPEPGGSVTKGNGFGAVESVKATSDVNSPISGEIVEVNDKLTGKPGLINSSPYEDGWMIKIKPSDPSELESLLGAKEYTKFCEEEDAAH 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00472 166 Gene3D - 31 162 - -
Tsu05g00472 166 Hamap Glycine cleavage system H protein [gcvH]. 39 160 IPR002930 GO:0005960|GO:0019464
Tsu05g00472 166 CDD GCS_H 44 138 IPR033753 -
Tsu05g00472 166 PANTHER GLYCINE CLEAVAGE SYSTEM H PROTEIN 1 166 IPR002930 GO:0005960|GO:0019464
Tsu05g00472 166 SUPERFAMILY Single hybrid motif 38 161 IPR011053 -
Tsu05g00472 166 Pfam Glycine cleavage H-protein 42 161 IPR033753 -
Tsu05g00472 166 TIGRFAM gcvH: glycine cleavage system H protein 40 163 IPR017453 GO:0005960|GO:0019464
Tsu05g00472 166 ProSiteProfiles Biotinyl/lipoyl domain profile. 57 139 IPR000089 -
Tsu05g00472 166 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 82 111 IPR003016 -
Tsu05g00472 166 PANTHER GLYCINE CLEAVAGE SYSTEM H PROTEIN 1 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00472 Tsu-Chr5 3666032 3667915 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00472 K02437 - vvi:100259229 280.796