Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00458 ATGGCTTCTTCTGAGAATTCCGTTGAAAGCAAGAGTTCTCTCACCAAGCTTGCTCCACTTGAAGCAGTGCTCTTTGATATAGATGGAACTCTTTGTGATTCTGATCCACTCCACTATTATGCTTTCCGTGAAATGCTCCAGGAGATTGGTTTCAATGGAGGTAATCCTATAACAGAGGAGTTTTTTATTGCGACTGTTGCTGGCAAGCACAATGATGACATTGCATCGGATCTCTTTCCTGGTGATCTGGAGCGAGGTTTAAAGTTTGTAGATGATAAGGAAGCCATGTTTCGGAGATTAGCGGCTGAGCAACTGAAGCCTTTAAATGGCCTCGCTAAAGTGAGGAAATGGATTGAAGATCGTGGGTTGAAGCGGGCTGCAGTTACCAATGCTCCAAGACCAAATGCAGAACTCATGCTCTCAATACTCGGTCTCACAGATTTCTTTGAGGCTGTTATTATTGGTGGTGAATGTGAACATGCCAAGCCTCATCCAGAACCCTACTTGAAAGGTCTTGAAGCTCTGAAAGCATCTAAGGAACACACATTTATATTTGAGGATTCTGTTTCAGGAATCAAAGCTGGAGTGGCTGCCGGGATGCCAGTTATAGGTATATCTACCAGAAATCCAGAGGATTTACTGATGGAAGCAAAACCTGCCTTTCTGATTAAGGATTACGATGACCCAAAATTGTGGGCAGCTTTGGAAGAACTTGACAAGTCTGGTTCTcgttaa 735 0.4327 MASSENSVESKSSLTKLAPLEAVLFDIDGTLCDSDPLHYYAFREMLQEIGFNGGNPITEEFFIATVAGKHNDDIASDLFPGDLERGLKFVDDKEAMFRRLAAEQLKPLNGLAKVRKWIEDRGLKRAAVTNAPRPNAELMLSILGLTDFFEAVIIGGECEHAKPHPEPYLKGLEALKASKEHTFIFEDSVSGIKAGVAAGMPVIGISTRNPEDLLMEAKPAFLIKDYDDPKLWAALEELDKSGSR 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00458 244 Gene3D - 21 228 IPR023214 -
Tsu05g00458 244 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 20 228 - -
Tsu05g00458 244 SUPERFAMILY HAD-like 16 237 IPR036412 -
Tsu05g00458 244 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 2 241 - -
Tsu05g00458 244 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 20 228 - -
Tsu05g00458 244 Gene3D Putative phosphatase; domain 2 35 103 IPR023198 -
Tsu05g00458 244 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 94 205 IPR006439 -
Tsu05g00458 244 CDD HAD_BPGM-like 22 205 - -
Tsu05g00458 244 Pfam Haloacid dehalogenase-like hydrolase 23 205 IPR041492 -
Tsu05g00458 244 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN-CONTAINING PROTEIN SGPP 2 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00458 Tsu-Chr5 3556457 3559550 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00458 - - cam:101496926 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00458 05 3556457 3559550 Tsu05g00458 05 3556457 3559550 ECH