Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu05g00456 | ATGTCAGGGGCACAGATGGATCCGCATGACAAGATGAGAGCGAGGGATGTGAGCAAAGTGGCACGAGGTGAACAAGCTCCAAGGCCTGCTCATGAATTTGGAACCGTTTCTCCACCCCCTCCACCTTCTTCAACTAACAACGCTCTTCACACCACtaccaacaacaacaagAAACAGGGGGAAAAGGCACGGACAGGAGAAAACGGCGTGGAATCGCCATCAAGTGATTACCAAATACGCCATTGTTACACAAAATATGTGGAATATCAAAGGTGCATTCAAAAGAAGGGTGAAAAGGCACCCGAATGCCAAAAAATTAGCACACATTTTAGGTCCATGTGTCCAACCGAATGGATTACAGAATGGGATAAAGAGAGAGAAGAGGGAAAGTTTCCTGAAAAAATATAG | 408 | 0.4412 | MSGAQMDPHDKMRARDVSKVARGEQAPRPAHEFGTVSPPPPPSSTNNALHTTTNNNKKQGEKARTGENGVESPSSDYQIRHCYTKYVEYQRCIQKKGEKAPECQKISTHFRSMCPTEWITEWDKEREEGKFPEKI | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu05g00456 | 135 | Pfam | Cytochrome oxidase c subunit VIb | 77 | 128 | IPR003213 | GO:0005739|GO:0045277 | |
| Tsu05g00456 | 135 | SUPERFAMILY | Cytochrome c oxidase subunit h | 77 | 135 | IPR036549 | GO:0005739|GO:0045277 | |
| Tsu05g00456 | 135 | MobiDBLite | consensus disorder prediction | 8 | 26 | - | - | |
| Tsu05g00456 | 135 | MobiDBLite | consensus disorder prediction | 1 | 75 | - | - | |
| Tsu05g00456 | 135 | Gene3D | Cytochrome c oxidase, subunit VIb | 42 | 135 | IPR036549 | GO:0005739|GO:0045277 | |
| Tsu05g00456 | 135 | PANTHER | CYTOCHROME C OXIDASE SUBUNIT 6B-3-LIKE | 1 | 135 | - | - | |
| Tsu05g00456 | 135 | CDD | Cyt_c_Oxidase_VIb | 78 | 134 | IPR003213 | GO:0005739|GO:0045277 | |
| Tsu05g00456 | 135 | PANTHER | CYTOCHROME C OXIDASE SUBUNIT 6B | 1 | 135 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tsu05g00456 | Tsu-Chr5 | 3546589 | 3547710 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu05g00456 | K02267 | - | gmx:102665439 | 183.341 |