Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00440 ATGGATGACACGAAGAAGAACATTTTCGGCGACGATTCCGACAACGAAAAAGATGGGACCCGCTCTTCTTCcccttcttcatcttcctccgccgcttcatcttcctcttcttcatcttcttccgcTTCTTCCTCTAACAATACCAAAGGTTCCGCCGATTCATCTTCCGGTACCGGAACTGCCACCAGCGGCGGTGCCGGTGACGATGAAGAAAACGGTGATGTTGTTGATAGTACTAATAAGGCTGATTCTCATCATtatgatgatgacgatgatgatcATGATCATCAATATGGAGATCTATTTGGTTCTGATAATGAAGATTACTCTAAAACCCTCGCTAAAAGTTCTCACCCTATTCCTGTATTGCCTGCCGTCCGCAACAATACGAACAACCCTGGAAGAGGGGGTTTTGGCCGTGGTGGTCGGCAGCAAGGGTATCCTAATGATAGAGGACCTGGCATTCTTCCGTCTCCTGGACCTTATCCTCCGAGGCAGAATTTCAGGTATGGTGGTAATAGGTTTCAGAATGGTCGTCACGATGAGCGATTTGTCTCTGAGATGAAGCTCTCGAAGAGTGAAGAAACTCTGTCAAGAAAAATCATTACTTTTCAGGAGCCTTGTGAACTTGGCTGCTATAGTCGTGTAGAAGGAGGTGAAGTATATTTTGATGACCGTAGCTTGAGACTTTTTAAACGCCATATCACTGAAGATATTGGAGCTGATTTGAACGAAGGTTATGATACATACATTCCTAAAAAAgACTTAGGTTCAGAGGGCTTTGGCGATCTACTTGCTTGCATTAGAGATAAAAATATCCCACTTCACGACCACATTCATTTTGTGACGTACCGCAACAATCTTAACAAGATACTAGCAACAGCTTATATTCGTCATGAGCCTTGGGAAATGGGAGTACACAGAAGGGATGGTGTTGTCTATCTCGATGTGCACAAGTTACCAGAAAGACCACAAAGTGATTTAGATCGTAGGAGATGTTATCTAGGATACGGTTTTGAGAGCCTTGCCACTGAAGATCCTAGAAGAGCTGATGGAGAGGGAGTACATCATGTTGATGCCAATGTTGAATTTTGTTCGCTGATTAAGACAAAATTGGGACCTCACCGTATCTTGATGGGTGCTGAGATGGATTGCTGCGATACCACTAATGACGGGAAGAGATTTTATGTGGAGTTAAAGACAAGTTATGAGTTGAATTATCATAACGAAGaaaaatttgagagagagaaacTGCTTAAGTTTTGGATTCAGTCATTCTTGGCAGGTGTCCCTTATATTTGTATAGGATTTAGGGATGATGCAGGTCGTCTTGTTCGGACAGAAATGCTTAGAACCAAAGATATTACGCAGAGGATAAAAATGAAGGGCTATTGGCAGGGGGGAGTCTGCCTTGCATTTGCGGACGAGGTATTGTGCTGGCTTTATGGAACAGTCAAAGAAAATGAAGATTACATATTGCAATTCGCTCCACCTTTCAACCGTTTGGAGCTGCTGCAAGCTCAGTCTTGCCCCGATGTAATAACGAGTCATTTGGAGCTGTTGTGA 1566 0.4074 MDDTKKNIFGDDSDNEKDGTRSSSPSSSSSAASSSSSSSSSASSSNNTKGSADSSSGTGTATSGGAGDDEENGDVVDSTNKADSHHYDDDDDDHDHQYGDLFGSDNEDYSKTLAKSSHPIPVLPAVRNNTNNPGRGGFGRGGRQQGYPNDRGPGILPSPGPYPPRQNFRYGGNRFQNGRHDERFVSEMKLSKSEETLSRKIITFQEPCELGCYSRVEGGEVYFDDRSLRLFKRHITEDIGADLNEGYDTYIPKKDLGSEGFGDLLACIRDKNIPLHDHIHFVTYRNNLNKILATAYIRHEPWEMGVHRRDGVVYLDVHKLPERPQSDLDRRRCYLGYGFESLATEDPRRADGEGVHHVDANVEFCSLIKTKLGPHRILMGAEMDCCDTTNDGKRFYVELKTSYELNYHNEEKFEREKLLKFWIQSFLAGVPYICIGFRDDAGRLVRTEMLRTKDITQRIKMKGYWQGGVCLAFADEVLCWLYGTVKENEDYILQFAPPFNRLELLQAQSCPDVITSHLELL 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00440 521 Coils Coil 518 521 - -
Tsu05g00440 521 MobiDBLite consensus disorder prediction 1 19 - -
Tsu05g00440 521 MobiDBLite consensus disorder prediction 74 102 - -
Tsu05g00440 521 MobiDBLite consensus disorder prediction 1 165 - -
Tsu05g00440 521 MobiDBLite consensus disorder prediction 20 65 - -
Tsu05g00440 521 PANTHER BNAC01G10220D PROTEIN 17 521 - -
Tsu05g00440 521 PANTHER DOM-3 RELATED 17 521 IPR039039 -
Tsu05g00440 521 Pfam RAI1 like PD-(D/E)XK nuclease 383 445 IPR013961 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00440 K14845 - gmx:100798780 792.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00440 05 3331270 3336473 Tsu05g00440 05 3331270 3336473 ECH