Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00430 ATGGGTCGTAAAAGCTTTGAACCAAATGCTACTTTATTAAACCGTTTGATTCTTCTTTTGGTGTGTTTGGGTTCTTGTGGTTTGGTTTATGTTTTTCTCAACGTGATAACTAGAAGTGGTTCTGTTTCTGAGTTGAGAATTGGGTCAACGTTAGATTTGGTTGGTGAGAATGTTGTTGGTGGGTGTTGTAGAGGGGTTGAAAATTTGGAACTTTGGGGTTCAGCTGTGAAATGGGGTTCTGATTTCAAATTCAATACTTCTGAAGGTTGTTGTAATGCTTGTAAATCTATGTGTACTGGAAAAGATGGTCCTTGTCTTTGTGATAGTTGGGTGTTTTGTGGTAATCGTCAAGCTTGTGGCTCAAAATTCGGCGAGTGTTGGTTGAAGAAACAAAAGGACAGCTTAGCTCCTGAGCGGCAAGAAGAAGCACCTCATGGGGAGACAATTCATTGGACTTCCGGTCTCATCTTTGGAAAAGGCGAGGGTATTATTGGATTGGAAACTGAACACGGAACTCTTCATATAAAACTTTTCCCTGACTGTGCTCCACACACAGTTGCCTATATTCTAGAGTTGTTGCCTATGCGCCATTGTGCAGGCTGTCAATTTTACCGTGCAGAGAGTCGAGGTCAATCATGGGATTCAGAAGGAAACCACATAAAAAATGCTGGTTTTGGTCCCCCATTTGCATTAATTCAAGGTACATTAGAAGCACAAGGCACACCATTCAATAAACTTCCTTTGGAAGACTGTCCAATCTTAAGAAGAGGCTCAGTTGCTTTGATTGGTCCTGGTCCAGAATTCTTTATTAGTCTAGCTGATCATTCAGAGTGGAAACAAGAATACACTGTCTTCGGTTCTGTTCTTCCGGAAGACATGAATGTTGCCGAGAAAATTGCTGCACTCCCCACATTACCTGATGTTTGGAACAATGTTAATGTGACCGTTTTGGAAAAACCTGTTCCTTTCTTGTTCAGAAGAATCAATAAAAGCAGTCAAGATTGA 1005 0.4109 MGRKSFEPNATLLNRLILLLVCLGSCGLVYVFLNVITRSGSVSELRIGSTLDLVGENVVGGCCRGVENLELWGSAVKWGSDFKFNTSEGCCNACKSMCTGKDGPCLCDSWVFCGNRQACGSKFGECWLKKQKDSLAPERQEEAPHGETIHWTSGLIFGKGEGIIGLETEHGTLHIKLFPDCAPHTVAYILELLPMRHCAGCQFYRAESRGQSWDSEGNHIKNAGFGPPFALIQGTLEAQGTPFNKLPLEDCPILRRGSVALIGPGPEFFISLADHSEWKQEYTVFGSVLPEDMNVAEKIAALPTLPDVWNNVNVTVLEKPVPFLFRRINKSSQD 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00430 334 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASES 1 331 - -
Tsu05g00430 334 PANTHER EXPRESSED PROTEIN 1 331 - -
Tsu05g00430 334 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 166 308 IPR002130 GO:0000413|GO:0003755
Tsu05g00430 334 Gene3D - 157 319 IPR029000 -
Tsu05g00430 334 SUPERFAMILY Cyclophilin-like 159 316 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00430 Tsu-Chr5 3243930 3247809 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00430 - - gmx:100820360 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00430 05 3243930 3247809 Tsu05g00430 05 3243930 3247809 ECH