Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00428 atggTTCTTCAATTTCACGAACACATAATCACAGAGCTTTTAGAAGATTCCAATGGTGGTCTCGTTATTCTCTCTTCAGGTCTCTCTCTATCAAAACTCATTTCATCTCTTCTCCTTCTCCATTCATCTTCTCAAGGAACACTCCTCATTCTCACTCCTTCTTCCACCACtctcaaatccaaaatcaatttccatctcaaaaccctaaacccccaATTTTATCAAATCCCCGCCGAAATCACCGCCGATCTCCCCAGTCACCACCGTCACTCTCTCTACACATCCGGTTCCGTCTTTTTCATCACTCCTCGAATACTAATCGTTGATCTCCTCACGAAAAAACTACCTACATCAACGATTTCAGGACTTATCATTCTCAACGGTCATTCCATTTCTGAAACTTCTACTGAAGCTTTTATTGTTAGGATTTTTCGTTCGCTTAACCGTGATGGATTTATTCGTGTTTTCTCCGATAGACCGCAGGCGATGGTTTCCGGTTTTGCCAAAGCGGAGAAGACTATGAAGTGTTTGCATATACGGAAAATGCATTTATGGCCGAGATTTCAGGTTTATGTTTCTCAGGAGCTTGAGAAGGATCCACCGGATGTTGTGGATATTAGGGTTCCGATGAGTAAGTATATGATGGGGATTCAGAAGGCTATTATTGAGGTTATGGATGCGTGTTTGAAGGAGATGAGAAAGACGAATAAGGTTGATATCGAGGATTTGACGGTGGAGAATGGGTTGTTTAAGTCTTTTGATGAGATTGTGAGGAGACAGTTGGATCCAATTTGGCATACTTTGGGGAAGAAGACTAAGCAGCTTGTTTCCGATCTTAAGACGTTGAGGAAGTTGTTGGATTATCTAGTCAGGTATGATGCAGTGACATACTTGAAATATTTGGATACACTTAGAGTGTCGGAGAGTTTTCGATCTGTTTGGATATTTGCAGAGGCGAGCTACAAGATATTTGACTATGCAAAGAAACGTGTTTATCATCTTGCAAGGTCAGATGGTGTGAAATTGAATGAGTCTAGTAAGggtgtcaaaaacaaaaagaaaaaaggcaAGGGGGATAACAAAGAAACTGAAGAAGCTGATGTCGATTCATCAACCAGTTCAAATCATGGCATAGTTTTGGAGGAAGTCTTGGAAGAAGCACCAAAGTGGAAGGTCTTACGTGATATTCTTGAAGAGGTAGAGGAGGATCGGCAAAAGCAAGGCATGTTGAGGGAAGAAGTGTTGGCTGAAGGCGAAGACACCGACAATGGCATTGTATTGGTGGCATGTAAAGATGAAAGGTCGTGCTTGCAGCTTGAAGAATGCATCACCAACAGTCCGAAAAAGGTCATGAGAGACGAATGGAAGAAGTACTTACTAAACAAGGTACAATTACGTGATGTAGTGAATAAGAAAAAGAAGCCAAAGGATCCTAAAGGTTTTGGGATTCTTAACGGAGTCACTCCCGTATCTCCTGCACAGAATTCTGAAACCAGCGGCATTAATAAGCAGGAGCATGATGCACTTCTGGCAGCAGCTTCAAAACTGCGAAATCTTGCTGAAAATAATCAGGTTGTCGAAGATGCTCCTCAATCTGATTTGGGTGGACATGTTCGTGGAAAAGGCAAGCGAAAATTGGGAAATAGAAATGCCCCAATCATTCTTGATGGCTCAGGTGTTCAGAGTAACAAGAATGAGGAAGTGGCAAGTGGTAAAACTGGGATGTCAGATTCAAAAAATAAAGCCCATATGGGTGAAACTAGTCCTGTCATTGCTGGTGGATTTTGTGAAACCAAACATGGGGGGATATCTGTAGAAGATAAGGTTCTTCGGAGGCATACCTGTCCTGATGCAGTGGGAAGAGATGGGAAGCCACTACCGCCATTACATTTTTATGCCCTAGAAAGTGATCAGCCTATACTAGACATATTAAAGCCCTCTATAATCATTGTTTACCATCCAGACATGACCTTTGTAAGAGAAATTGAAGTCTACAAAGCTGAGAATCCCTCAAAAAGGTTaaaggtttattttattttctatgaaGATTCAACTGAGGTTCAGAAGTTTGAGGCAAGTATACGTAGAGAGAATGGAGCATTTGAATCTTTGATCAGGCAAAAATCTATGATGATGTTTCCAGTTGACCTGAGTGGGCATGGTTTAGGATTGAATTCTACCCTAGATTCAGATTTAAATACTACCCAGAACTCAATAACCAGAAAAGCAGGTGGGAGAAAGAAGGTTGATAAGGAAATGCAGGTCATTGTGGACATGAGGGAATTCATGAGCAGCCTTCCAAATATTCTTCATCAAAAGGGAATGCGCATAATTCCGGTGACCCTTGAAGTTGGTGACTATATCCTATCACCATTAATTTGTGTGGAAAGAAAAAGTATTCAAGATCTCTTCCAGAGTTTCACATCAGGTCGTCTATACACCCAGGTGGAAACAATGGTGCGATATTATAAGATACCTGTGCTCTTGATTGAGTTTTCACAGGATAAGAGCTTCTCATTTCAGTCTGCTGGTGATATTGGTGATGATGTGACACCCTATAGCATTATATCAAAGTTGTCGTTGCTTGCTCTACATTTTCCCCGACTAAGAATAATCTGGTCTCGAAGTTTGCATGCTACTTCTGAAATATTTGCTTCACTGAAGGCAAATCAAGATGAACCAGATGAAACAAAAGCAATGAGAGTGGGTGTTCCATCAGAAGAAGGAATTGTGGAAAATGACGTGAGGGCGGAAAATTACAATACATCGGCTGTGGAGTTTCTAAGACGACTTCCAGGTGTTACAGATTCTAATTATAGAGCCATAATGGATGGGTGTAAGAGTTTGGAAGAACTTGCTCTTCTTCCAGTGGAAAAGCTAGCTGAAATAATGGGTGGTCATAAAGCTGCTCGTACCCTTAGAGACTTTCTAGATGCTAAATATCCCACTTTGTTGTGA 2958 0.4003 MVLQFHEHIITELLEDSNGGLVILSSGLSLSKLISSLLLLHSSSQGTLLILTPSSTTLKSKINFHLKTLNPQFYQIPAEITADLPSHHRHSLYTSGSVFFITPRILIVDLLTKKLPTSTISGLIILNGHSISETSTEAFIVRIFRSLNRDGFIRVFSDRPQAMVSGFAKAEKTMKCLHIRKMHLWPRFQVYVSQELEKDPPDVVDIRVPMSKYMMGIQKAIIEVMDACLKEMRKTNKVDIEDLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAEASYKIFDYAKKRVYHLARSDGVKLNESSKGVKNKKKKGKGDNKETEEADVDSSTSSNHGIVLEEVLEEAPKWKVLRDILEEVEEDRQKQGMLREEVLAEGEDTDNGIVLVACKDERSCLQLEECITNSPKKVMRDEWKKYLLNKVQLRDVVNKKKKPKDPKGFGILNGVTPVSPAQNSETSGINKQEHDALLAAASKLRNLAENNQVVEDAPQSDLGGHVRGKGKRKLGNRNAPIILDGSGVQSNKNEEVASGKTGMSDSKNKAHMGETSPVIAGGFCETKHGGISVEDKVLRRHTCPDAVGRDGKPLPPLHFYALESDQPILDILKPSIIIVYHPDMTFVREIEVYKAENPSKRLKVYFIFYEDSTEVQKFEASIRRENGAFESLIRQKSMMMFPVDLSGHGLGLNSTLDSDLNTTQNSITRKAGGRKKVDKEMQVIVDMREFMSSLPNILHQKGMRIIPVTLEVGDYILSPLICVERKSIQDLFQSFTSGRLYTQVETMVRYYKIPVLLIEFSQDKSFSFQSAGDIGDDVTPYSIISKLSLLALHFPRLRIIWSRSLHATSEIFASLKANQDEPDETKAMRVGVPSEEGIVENDVRAENYNTSAVEFLRRLPGVTDSNYRAIMDGCKSLEELALLPVEKLAEIMGGHKAARTLRDFLDAKYPTLL 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00428 985 MobiDBLite consensus disorder prediction 530 584 - -
Tsu05g00428 985 MobiDBLite consensus disorder prediction 472 500 - -
Tsu05g00428 985 Pfam ERCC4 domain 757 886 IPR006166 GO:0003677|GO:0004518
Tsu05g00428 985 SMART ERCC4_2 754 834 IPR006166 GO:0003677|GO:0004518
Tsu05g00428 985 SUPERFAMILY Restriction endonuclease-like 751 889 IPR011335 -
Tsu05g00428 985 MobiDBLite consensus disorder prediction 555 583 - -
Tsu05g00428 985 Gene3D - 912 983 - -
Tsu05g00428 985 Gene3D - 754 900 - -
Tsu05g00428 985 SUPERFAMILY RuvA domain 2-like 916 980 IPR010994 -
Tsu05g00428 985 MobiDBLite consensus disorder prediction 345 369 - -
Tsu05g00428 985 MobiDBLite consensus disorder prediction 345 374 - -
Tsu05g00428 985 PANTHER DNA REPAIR ENDONUCLEASE XPF 2 981 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00428 K10848 - gmx:100812359 1600.88