Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00409 ATGGTGTTACAGAAGACGATGATCATGTTGCTGCTGCGTCTTCCGTCTCTATCTTTTCCCTTCATCttcactcttttcttcttcatcttcccaATTTCATACTCTATACCCTTCATTGTCATTCATGGAATTGGGGATCAGTGTTCTAACCATGGAGTCAAATCATTCACTGAGGAATTGATCACCTACTCTGGTGTTCAAGGATTTTGCGTTGAGGTAGGCAATGGATCATGGGATTCATGGTTTATGCCTTTGCAAGAGCAGGCAGATGTTGTTTGCCAGAAGGTGAAGGAAATGAAAGAATTGAAGGGAGGATATAACATTGTTGGCCTCTCCCAGGGAAATTTAATTGGTCGGGGTGTGGTCGAGTTTTGTGAAGGAGGACCTCCCGTTAAGAACTTTATCTCTTTAGCGGGTCCTCATGCTGGTACTGCTTCAGTTCCTCTGTGTGGTAAAGGTATCTTTTGCATCGTTGCAGACAATCTCATCAAAGGAGAGGTTTACAGTACCTATATTCAAGTATTTATCTATcttctatttattttctcttttgtcggatctgtaattttttttcttcttttcttgcaTAACATATTTACTTTGCCCAATCGTTATTTTGTCGCTCATTATTTTTTGCTCACTTTACAGTCTCTAACATACCTCAATTCAAAACACTGCAGGAACACTTGGCTCCTAGCGGATATCTTAAATTACCAAACGTAA 723 0.3638 MVLQKTMIMLLLRLPSLSFPFIFTLFFFIFPISYSIPFIVIHGIGDQCSNHGVKSFTEELITYSGVQGFCVEVGNGSWDSWFMPLQEQADVVCQKVKEMKELKGGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFISLAGPHAGTASVPLCGKGIFCIVADNLIKGEVYSTYIQVFIYLLFIFSFVGSVIFFLLFLHNIFTLPNRYFVAHYFLLTLQSLTYLNSKHCRNTWLLADILNYQT 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00409 240 PANTHER PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 21 174 - -
Tsu05g00409 240 Pfam Palmitoyl protein thioesterase 37 174 - -
Tsu05g00409 240 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 21 174 - -
Tsu05g00409 240 Gene3D alpha/beta hydrolase 32 183 IPR029058 -
Tsu05g00409 240 SUPERFAMILY alpha/beta-Hydrolases 35 174 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00409 Tsu-Chr5 3091128 3097082 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00409 32 173 Acyl Lipid Metabolism Gene Families AT3G60340 64.085 5.67e-68 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00409 K01074 - gmx:100809770 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00409 05 3091128 3097082 Tsu05g00409 05 3091128 3097082 ECH