Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00379 ATGGCGGGAGCCATTGGAACGATAGCGTCGTGTGTTTTCTGTAACATAGCGACCAATTCCAACTCCAATACTATTCTCCACTCCGATGATAAGGTTGTTGCTTTTCAGGACATTAATCCATCTGCTTTCAGGCATTACTTAGTGGTTCCTGTAGAGCACATTCCTACTGTTAAGGATCTTCAGAGAAAGACCGAAGATCATTCTTTGGTGAGTCACATGTTAGATGTGGGAAAAATGTTGTTACTCAGAGATGCACCTCACTCAAAGCAGTACAGATTTGGCTTTCATCAGCCTCCAATGAACTCTGTTAACCATCTACACCTCCATTGTTTTGCACTACCATATACACCCAGATGGAGATATATAAAATACTTGTCTTTCGGACCACTTGGTTTCATTGAAGCGGAGAAGTTTCTGGAAAAGATAAAGCCTTAG 435 0.4161 MAGAIGTIASCVFCNIATNSNSNTILHSDDKVVAFQDINPSAFRHYLVVPVEHIPTVKDLQRKTEDHSLVSHMLDVGKMLLLRDAPHSKQYRFGFHQPPMNSVNHLHLHCFALPYTPRWRYIKYLSFGPLGFIEAEKFLEKIKP 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00379 144 SUPERFAMILY HIT-like 8 127 IPR036265 -
Tsu05g00379 144 Pfam Scavenger mRNA decapping enzyme C-term binding 10 118 - -
Tsu05g00379 144 PRINTS Histidine triad family signature 33 51 IPR001310 -
Tsu05g00379 144 PRINTS Histidine triad family signature 101 111 IPR001310 -
Tsu05g00379 144 PANTHER APRATAXIN-RELATED 7 143 - -
Tsu05g00379 144 ProSiteProfiles HIT domain profile. 12 121 IPR011146 GO:0003824
Tsu05g00379 144 Gene3D - 3 116 IPR036265 -
Tsu05g00379 144 PANTHER HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 3 7 143 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00379 K22966 - gmx:100799719 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00379 05 2832849 2834776 Tsu05g00379 05 2832849 2834776 ECH