Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00347 ATGAAAGATATGAAACTAATTTGGTCTCCAGAAAGAGCAACAAACTCATACATAGACACAGTTCAATCAGTAACAACAAATCATCTTTCCAACGAATCAGGTGTAGCGGAGCTGATATCCGCCATGGCGGCAGGATGGAACACGCAGCTGATAGTAGAAACATGGTCACGCGGCGGAGCTATTCCAACGAGTATTGGTTTATCTATAGCATCACGTCACACGTGTGGAAGACACGTGTGTATAGTACCAGATGAACGGTCAAgatcagagtatgcaaaaagtATGGGTGAAGCGGGCATGACGCCGGAGATTATGGTTGGTGAACCAGAGGAAGTTATGGAGGGTATAATTGGAATAGATTTTTTAGTTGTTGATTCTAGGAGAAAAGATTTTGCTAGAGTTTTGAGGTTAGCGAAGTTAAGTAGTAAAGGTGCTGTGTTGATTTGTAAgaatgcaaattttatttctaagaTGGATTCTGGTTTTATATGGAGGAGCGTGGTGGCGCGTGGATTAAGACGGCTTGTCAGGTCGGTGTTTCTTCCGGTTGGGAAGGGGATTCATATGGCGCACTTTGCAGCTGCCGGTGGTGGTGAGAACACTGTTTCGGCGATGAAGCATAAGGGACGTACTTCTAACCGATGGATCAAACATGTTGATCAACGGTCAGGGGATGTTCACTTTATTAGAAAATGA 696 0.4195 MKDMKLIWSPERATNSYIDTVQSVTTNHLSNESGVAELISAMAAGWNTQLIVETWSRGGAIPTSIGLSIASRHTCGRHVCIVPDERSRSEYAKSMGEAGMTPEIMVGEPEEVMEGIIGIDFLVVDSRRKDFARVLRLAKLSSKGAVLICKNANFISKMDSGFIWRSVVARGLRRLVRSVFLPVGKGIHMAHFAAAGGGENTVSAMKHKGRTSNRWIKHVDQRSGDVHFIRK 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00347 231 Pfam Protein of unknown function (DUF1442) 4 231 IPR009902 -
Tsu05g00347 231 PANTHER ANKYRIN REPEAT/KH DOMAIN PROTEIN (DUF1442) 4 231 - -
Tsu05g00347 231 PANTHER DUF1442 FAMILY PROTEIN 4 231 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00347 Tsu-Chr5 2563413 2564452 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00347 - - mtr:MTR_5g011820 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00347 05 2563413 2564452 Tsu05g00347 05 2563413 2564452 ECH