Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00337 atgtCAACTTCCTCTCAAGGCAGTAGTAGTAACAGAAACAGTAACGGTAGAACCTCTCTCAAACCGTCGTCAAATCTTAAACCCAAACCAACTCAACGCCgtaacaccaccaccaccaccaccgccgTCAAAGACCATACCACCGTTCCTGGAAGAGTTAGAGTGGCCGTTAGGTTGCGGCCTCGAAATGCGGAGGAATCAGTGGCAGATGCTGATTTTGCTGACTGTGTTGAATTACAGCCGGAGCTCAAGAGGTTGAAACTTAGGAAGAACAATTGGGATGGAGAGACTTATGAATTTGATGAGGTGCTCACTGAATTCGCGTCGCAAAAACGTGTTTATGAAGTTGTGGCTAGGCCTGTTGTGGAGAGTGTACTGGATGGCTACAATGGGACAATTATGGCATATGGGCAGACTGGTACTGGTAAAACTTATACTCTTGGAAGACTTGGGGAGGAAGACACAGCTGCACGTGGAATAATGGTACGGGCTATGGAAGATATTTTTGCAGATGTCTCCTTGGAAACGGATTCGGTCTCAGTCTCATATTTGCAGCTTTATATGGAGACTATACAGGACCTACTTGACCCTGCCAATGATAACATAGCCATTGCAGAAGATCCCAAAACTGGTGATGTTTCACTACCCGGAGCTACTCTAGTCGAGATTAGGGACCAGCAGAGTTTTATTGAACTGCTAAGATTAGGAGAGGCTCACCGCTTTGCTGCAAATACGAAACTGAATACCGAGTCTTCAAGAAGTCATGCTATTCTAATGGTGCATGTAAAGAGATCCGTCAAGGGAAGAGATGCTTCACATTCAAGTGAAAATggaaatcattcacatatgGTAAAATCGTTAAAGGCACCTATTGTTCGAAAAGCTAAGCTGGTTGTTGTAGATCTTGCTGGTTCAGAACGAATTGACAAATCAGTAGGAAGTGAAGGACATATGTTAGAAGAAGCCAAATCCATCAATCTGTCTTTGAGTGCATTGGGGAAATGTATCAATTCACTTGCAGAGAATAGTGCACATGTTCCATTTCGTGACTCAAAGCTTACTAGATTGTTACGTGATTCATTTGGAGGTACAGCAAGAACTTCACTTGTCATTACTATTGGACCATCACCACGTCATAGGGGTGAAACTGCCAGTACTATAATGTTTGGACAGAGGGCTATGAAAGTGGAAAACATGATAAAGTTAAAGGAGGAATTTGATTACAAAAGCTTATCAAGAAGACTAGACATAGAATTAGATAAACTCATAATGGAACATGAAAGACAGCAGAAGGCATTTGAGGATGAGATTGAAAGGTTAGCTACTGAAGCACAACATCGGATATCTGAGGCTGAAAGAAACTATGCAGATTCATTGGAGAAAGAAAGATCAAAATATCAGAAAGACTATATGGAGTCAATTAAGAAGCTTGAAGAGAAGTTTGTAACGAATCAACGAAAGAATGAGGATCCTCGTATAAAGTCAAGCACCGAGATTCCTGGGGTATCTGTTGAGGAAATGgctaatttgaagaaaatgctTCAAAAGGAGACTCTTTTAAGAAAAGCTGCCGAAGGGGAGACAAATAATTGGAAGATTCAAGTGGCTGAACTAAAACAGTCAGAGGCATCAGCAAAGTCAGATATATCAAAACTTCATAAGATGTTGGAAGACGAGGCTCATCAGAAAGAGAAACTTGAAGGAGAAATAGCGATATTACAAAGTCAATTGTTGCAATTAAGTCTTGAAGCCGATGAGACAAGACGACATCTAGACGGGGGTGGGTTTGACAAAGAAGTGGGTGGTCATGATTCTGTCCCTTCCCAAATTAAGCACCAGCAGCAAGTTTCAGGAAATGGGGCAAAGCCTTCAATAGCCAAGCTCTTTGAGCAAGTGGGATTGCAGAAGATTTTGTCATTGCTTGAATCAGAAGATGCTGATGTGCGAATCCATGCTGTGAAAGTTGTTGCAAATCTAGCTGCCGAAGAAACAAATCAGGGGAAGATCGTTGAAGCGGGGGGACTTACTTCCTTGCTTACACTACTTAAGACCACACAAGATGAGACCATACATAGAGTTGCTGCAGGTGCTATTGCAAATTTGGCAATGAATGAAAGCAACCAAGAACTCATTATGGCCCAAGGGGGCATTAGTTTGCTGTCAATGACTGCTGCCAATGCTGATGATCCTCAAACTCTTCGAATGGTTGCTGGAGCTATTGCTAATCTATGTGGCAATGATAAGCTACAAACAGAATTAAGGGGCGAAGGTGGTATCAAGGCACTGCTGGGAATGGTGAGATGCAGACATCCTGATGTGCATGCACAGGTTGCTCGAGGAATAGCAAATTTTGCGAAGTGCGAGTCAAGAGCGTCTAGTCAAGGGATAAAGAGCGGAAGATCTTTCCTTATTGAGGATGGTGCCCTTTCATGGATTGTTCAAAATGCAAATAACGAAGCCTCGTCAATTAGGCGTCATATTGAGCTTGCACTCTGTCACTTAGCACAACATGAAGCAAATGCAAGAGATATGATTAAGGGGGGTGCATTATGGGAGCTAGTTCGTATCTCACGAGAATGTTCTAGAGAAGACATAAAGACTCTTGCACATCGAACACTAGCCTCCAGCCCTGCTTTCCAAGCTGAAATGAGGCGTTTGCGGCTGAGTCACTGA 2673 0.4175 MSTSSQGSSSNRNSNGRTSLKPSSNLKPKPTQRRNTTTTTTAVKDHTTVPGRVRVAVRLRPRNAEESVADADFADCVELQPELKRLKLRKNNWDGETYEFDEVLTEFASQKRVYEVVARPVVESVLDGYNGTIMAYGQTGTGKTYTLGRLGEEDTAARGIMVRAMEDIFADVSLETDSVSVSYLQLYMETIQDLLDPANDNIAIAEDPKTGDVSLPGATLVEIRDQQSFIELLRLGEAHRFAANTKLNTESSRSHAILMVHVKRSVKGRDASHSSENGNHSHMVKSLKAPIVRKAKLVVVDLAGSERIDKSVGSEGHMLEEAKSINLSLSALGKCINSLAENSAHVPFRDSKLTRLLRDSFGGTARTSLVITIGPSPRHRGETASTIMFGQRAMKVENMIKLKEEFDYKSLSRRLDIELDKLIMEHERQQKAFEDEIERLATEAQHRISEAERNYADSLEKERSKYQKDYMESIKKLEEKFVTNQRKNEDPRIKSSTEIPGVSVEEMANLKKMLQKETLLRKAAEGETNNWKIQVAELKQSEASAKSDISKLHKMLEDEAHQKEKLEGEIAILQSQLLQLSLEADETRRHLDGGGFDKEVGGHDSVPSQIKHQQQVSGNGAKPSIAKLFEQVGLQKILSLLESEDADVRIHAVKVVANLAAEETNQGKIVEAGGLTSLLTLLKTTQDETIHRVAAGAIANLAMNESNQELIMAQGGISLLSMTAANADDPQTLRMVAGAIANLCGNDKLQTELRGEGGIKALLGMVRCRHPDVHAQVARGIANFAKCESRASSQGIKSGRSFLIEDGALSWIVQNANNEASSIRRHIELALCHLAQHEANARDMIKGGALWELVRISRECSREDIKTLAHRTLASSPAFQAEMRRLRLSH 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00337 890 Pfam Kinesin motor domain 58 396 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g00337 890 Gene3D - 612 722 IPR011989 -
Tsu05g00337 890 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 673 716 IPR000225 GO:0005515
Tsu05g00337 890 MobiDBLite consensus disorder prediction 1 47 - -
Tsu05g00337 890 ProSiteProfiles Kinesin motor domain profile. 52 396 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g00337 890 PANTHER KINESIN-RELATED 37 882 IPR027640 GO:0003777|GO:0007018
Tsu05g00337 890 CDD KISc 52 394 - -
Tsu05g00337 890 Gene3D Kinesin motor domain 42 426 IPR036961 -
Tsu05g00337 890 SMART arm_5 662 703 IPR000225 GO:0005515
Tsu05g00337 890 SMART arm_5 746 786 IPR000225 GO:0005515
Tsu05g00337 890 SMART arm_5 704 745 IPR000225 GO:0005515
Tsu05g00337 890 SMART arm_5 621 661 IPR000225 GO:0005515
Tsu05g00337 890 Coils Coil 423 476 - -
Tsu05g00337 890 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 431 IPR027417 -
Tsu05g00337 890 Pfam Armadillo/beta-catenin-like repeat 669 702 IPR000225 GO:0005515
Tsu05g00337 890 Gene3D - 723 885 IPR011989 -
Tsu05g00337 890 SUPERFAMILY ARM repeat 623 874 IPR016024 -
Tsu05g00337 890 MobiDBLite consensus disorder prediction 1 46 - -
Tsu05g00337 890 PANTHER KINESIN-LIKE PROTEIN KIN-UA 37 882 IPR033291 GO:0008017|GO:0032886|GO:0048364
Tsu05g00337 890 PRINTS Kinesin heavy chain signature 128 149 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g00337 890 PRINTS Kinesin heavy chain signature 296 314 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g00337 890 PRINTS Kinesin heavy chain signature 346 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g00337 890 PRINTS Kinesin heavy chain signature 272 289 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g00337 890 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 632 674 IPR000225 GO:0005515
Tsu05g00337 890 Coils Coil 549 583 - -
Tsu05g00337 890 ProSitePatterns Kinesin motor domain signature. 295 306 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tsu05g00337 890 SMART kinesin_4 50 404 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g00337 890 Coils Coil 507 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00337 Tsu-Chr5 2474020 2482943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00337 53 422 Miscellaneous Gene Families AT2G21380 34.103 5.23e-45 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00337 - K10396 gmx:100804612 1473.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00337 05 2474020 2482943 Tsu05g00337 05 2474020 2482943 ECH