Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00335 ATGAAGCAAAAAACAATGTCGATTTTGGAGATTCTGAAGCAAGCAAATTCACTTCTACCTTACGTAGTCTTCGCTAGCACACTTCTAGCTCTTATCTTCCCACATTCTTTTACGTGGTTTACCAGCAGATACTATGCTCCTGCATTAGGATTTTTGATGTTTGCAGTTGGAGTTAATTCAAGCGAAAAGGACTTCCTTGAAGCATTTAACAGGCCAGCAGAACTTGTGACTGCTTATGTTGGTCAGTTTGTGGTGAAGCCTCTTCTCGGATATTTTCTTTGCATAATTTCAgtaaatgtatttggtctacCAACAGCAATAGGCGCAGGAATTGTATTGCTGGCTTGTGTTAGCGGAGCTCAGCTCTCAAGTTATGCTACTTTTCTATCAGACCCACAAATGGCACCATTAAGCATAGTTATGACATCGTTATCTACTATTTCTGCGGTTTTTATCACACCTCTCTTATTATTGTTGCTTATCGGGAAGAAACTGCCTATAGATGTAAAAGGAATGGTGTTTAGCATTACACAGGTTGTGCTTGTTCCTATTACATTTGGTCTACTTCTAAATCGctTCTTTCCTCGTATTTGTAATGCTATTCGACCGTTTTTGCCTCCACTATCAGTATTGGTAGCAGCTCTCTCTGCAGGAGCACCACTTGCTCTTAACATTGAGTCAGTTAAATCCCCCTTTGGTTTCGCTATCTTTTTGCTCGCTGTTTCTTTTCATTTGTCATCTTTTGTAGCTGGTTATATTCTTAGTGGATTCGTCTTTCGTGATTCTCCTGATGTGAAACCGCTGCAGAGAACAATTTCCTTTGAGACAGGAATGCAAAGTAGCCTCCTTGCGTTGGCTCTTGCTAATAAATTCTTCGAAGATCCAGTTGTTGGTATGCCATCTGCAATTTCTTCTCCGCTCATGTCTTTGATGGGATTTTCTCTTGTTCTGATTTGGTCGAAAATAAAGAACAAGACAAAACAAGGAAGCTGA 993 0.3938 MKQKTMSILEILKQANSLLPYVVFASTLLALIFPHSFTWFTSRYYAPALGFLMFAVGVNSSEKDFLEAFNRPAELVTAYVGQFVVKPLLGYFLCIISVNVFGLPTAIGAGIVLLACVSGAQLSSYATFLSDPQMAPLSIVMTSLSTISAVFITPLLLLLLIGKKLPIDVKGMVFSITQVVLVPITFGLLLNRFFPRICNAIRPFLPPLSVLVAALSAGAPLALNIESVKSPFGFAIFLLAVSFHLSSFVAGYILSGFVFRDSPDVKPLQRTISFETGMQSSLLALALANKFFEDPVVGMPSAISSPLMSLMGFSLVLIWSKIKNKTKQGS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00335 330 PANTHER SODIUM-BILE ACID COTRANSPORTER 2 324 IPR004710 -
Tsu05g00335 330 Pfam Sodium Bile acid symporter family 47 229 IPR002657 GO:0016020
Tsu05g00335 330 PANTHER SODIUM/METABOLITE COTRANSPORTER BASS6, CHLOROPLASTIC-RELATED 2 324 - -
Tsu05g00335 330 Gene3D - 3 322 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00335 Tsu-Chr5 2462070 2463745 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00335 7 326 Organic Solute Cotransporters AT4G22840 68.750 3.16e-157 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00335 - - mtr:MTR_5g011450 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00335 05 2462070 2463745 Tsu05g00335 05 2462070 2463745 ECH