Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00330 ATGGAAAACAATGTTGGAATGTGGAAACAAGAAGTTATGATGATGGAAATAGAAAACGAAGTGTTTGGTGGAGAAGAtgatattgattttgattatgaatttcATGCTCCTAATTTCTTCGATTTCACTTCACAAGAAACTCCCGATCAAACTCAACAAGCTGAACGCTGGTTCGAAACCGCCGGAACCTACGCTCCTTCTCCTTTTGTAGCAAATCTTGTGATGAGAGAAGAGGTTCCGATCGCAAATACAACCACCGTTCATCAACCTAAACCTAAAGTTTTTCAGCATTACGGTTCAAAATTAGCGAGTGCTAGTGGCAAAATTTCTGGATTATTGGGAGGAATTCATCAAAATGTTGCTATGCAACCAGGAATGACCTTTAACAGCAGGACCGGTGAAGGTTTGAATCCGAAGGCTAAATCTGCTGTGTCAAAGGGTTCATCAACACTGATGAAACCTACAGCTAGTCAGTTGGCTAAGCAAAATCGGCCCTCTCAATTTGTTGGCTCAAGGTTTCAGAAGGTACCAGCTCATAAAAAGGAGATTAATTTAGCTAAGTCTATTGAGATAGAGAGTCAAGCTACCAAGCGGCAGAAATTAGATGGTGGTCTCTCACGCAAGGTTGGTGATGTGAATCAGCAAGCTAATTTTATCCACAAGGCACCTAAGAAGATTGTAACTGCTGATCAAAACACTGGATATTCCAAGCTTAAGATTACTATTCCTAGAGTGCCTGACCTAGAAACCTCTCATAGAGCACAAAGGATTAGACCCAAAAATGCTGCAGAAGCAGAACTCGTGACAGTGGCTGTACCCAAATTCAAAGCACGACCGTTAAACAGAAAAATTCTTAATGCTCCTTCATTACCACTTCATAAGAGAACCCCTGCACGGTTGCCCGAATTTCAAGAATTTCACCTCAAAACTTCGGAGAGAGCTGTGCAATACAAATCTGCTACTTCATCATCTGCACTTCCATGCAATGATTCTGATAAGGATTTGGACAAACATGCTTCTGTTTCTGCTCCACAAAACAGAATATGGAATTTCAGAAGGCCATCTGTGATTGGTGCTCCAAAGCATGATGGGTTGGATAGTGGGCATGAATTCAAAGCTCGACCATTTAATAAGAAGATATTTTCAAGTAAAGGAGATATTGGTGTTTTTCGCAACATTAAGCAGGAACCCACTGTGCCAATGGAATTTAATTTCCATACTGGAAAGAGGCTTCAGCATGACCCACCAACTGAACTCTTTAGTAAGTTGTCCCTGAGATCTGGAGCGCAGTCAACTATGTTCAACAAGgattcaaaagaaaatataggAACTTCTTTTCATCTGAACCAAAAGGAAAAGCCTTTTATATTTGGAGAAAAGCAAATTAATAGTGGGATGGAGTGTTGCTTCAGCAAAGCTGATACAGTATTGAGTGCAAGGAGGAGCTTGGGAATGCGGTGA 1461 0.4011 MENNVGMWKQEVMMMEIENEVFGGEDDIDFDYEFHAPNFFDFTSQETPDQTQQAERWFETAGTYAPSPFVANLVMREEVPIANTTTVHQPKPKVFQHYGSKLASASGKISGLLGGIHQNVAMQPGMTFNSRTGEGLNPKAKSAVSKGSSTLMKPTASQLAKQNRPSQFVGSRFQKVPAHKKEINLAKSIEIESQATKRQKLDGGLSRKVGDVNQQANFIHKAPKKIVTADQNTGYSKLKITIPRVPDLETSHRAQRIRPKNAAEAELVTVAVPKFKARPLNRKILNAPSLPLHKRTPARLPEFQEFHLKTSERAVQYKSATSSSALPCNDSDKDLDKHASVSAPQNRIWNFRRPSVIGAPKHDGLDSGHEFKARPFNKKIFSSKGDIGVFRNIKQEPTVPMEFNFHTGKRLQHDPPTELFSKLSLRSGAQSTMFNKDSKENIGTSFHLNQKEKPFIFGEKQINSGMECCFSKADTVLSARRSLGMR 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00330 486 MobiDBLite consensus disorder prediction 130 150 - -
Tsu05g00330 486 PANTHER CELL CYCLE REGULATED MICROTUBULE-ASSOCIATED PROTEIN 2 483 - -
Tsu05g00330 486 MobiDBLite consensus disorder prediction 319 341 - -
Tsu05g00330 486 Pfam Cell cycle regulated microtubule associated protein 238 405 IPR027330 -
Tsu05g00330 486 PANTHER TARGETING PROTEIN FOR XKLP2 2 483 IPR009675 GO:0005819|GO:0005874|GO:0032147|GO:0060236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00330 Tsu-Chr5 2434427 2440011 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00330 - - mtr:MTR_5g011390 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00330 05 2434427 2440011 Tsu05g00330 05 2434427 2440011 ECH