Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00317 ATGGGTACCCTAAATACTTCTCCTTTACTTACTTCTAAATTCAAACCTTCTTTTTCACCTcaacaaaaacctctttttccacATAGAAGACGGTTATGGAAGAAGAACCAATCGTTTGTTCCTGTTGCTAGGTTATTTGGACCAGCTATATTTGAAGCATCAAAATTGAAGGTTTTGTTCTTAGGAATTGATGAAGACAAACACCCAGGAAATCTTCCAAGGACATATACGTTAACACATAGTGATGTTACATCAAAACTCACTTTGGCAATTTCACAAACCATAAATAATTCTCAGTTGCAGGGATGGTACAATAGATTGCAAAGAGATGAAGTGGTGGCACAGTGGAAGAAGGTGAAAGGAAAGATGTCTTTACATGTTCATTGTCACATTAGTGGAGGCCATTTTTTGTTGGATATATTTGCTAGACTAAGATATTTCATCTTCTGCAAAGAGTTGCCAGTGGTAATAAAGGCATTTGTTCATGGAGATGGCAATTTATTCAACAACTATCCGGAATTACAGGATGCATTAGTTTGGGTATACTTTCATTCAAAGATACCAGAATTCAACAAGGTAGAATGTTGGGGTCCACTAAAGGAGGCTTCACAACCTAATGGTGGGACACAAGGGGACCACATTGGTTTAGAATTACCAAAAACATGTCAACAAGATTGTGAGTGTTGTTTTCCACCGTTGATGTTAAGTACCCCAATTCCGTGTTCTAATGAAGTTCCTAATGATACTTATGAACCTATTGATGGAATTGAAACACAAAAATCATAA 786 0.3575 MGTLNTSPLLTSKFKPSFSPQQKPLFPHRRRLWKKNQSFVPVARLFGPAIFEASKLKVLFLGIDEDKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLQGWYNRLQRDEVVAQWKKVKGKMSLHVHCHISGGHFLLDIFARLRYFIFCKELPVVIKAFVHGDGNLFNNYPELQDALVWVYFHSKIPEFNKVECWGPLKEASQPNGGTQGDHIGLELPKTCQQDCECCFPPLMLSTPIPCSNEVPNDTYEPIDGIETQKS 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00317 261 PANTHER PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED 2 249 - -
Tsu05g00317 261 PANTHER PROTEIN STAY-GREEN 1, CHLOROPLASTIC 2 249 - -
Tsu05g00317 261 Pfam Staygreen protein 51 202 IPR024438 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00317 Tsu-Chr5 2380380 2382836 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00317 K22013 - gmx:732541 424.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00317 05 2380380 2382836 Tsu05g00317 05 2380380 2382836 ECH