Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00316 ATGGACATGGCGGCATCAACGGATGAACCTCCTCAAGATCAAAATCAACATCACGATCTTCAACatcaacttcaacaacaacaacaccttTCTTCTCCACTCAAAGAATTTCTTCACAAAACCAAATCGATTCACTTTCTTGGTCGCACTACTCCGATCGTCCTTCAAAACGACAATGGACCTTGTCCTCTTCTCGCTATCTGTAATGTTCTTCTGCTACGGAACCAGTTAAGTTTGAGCTCGGATATTGCTGAAGTCTCACAGGAGAAGTTGCTTTCATTGGTTGCTGAACGATTGATTGATTCAAATAGTAATGTGAATAACAAAGATGCAGGCTATGTCGAAAATCAACAACAGAACATTTCCGATGCAATTGATTTGCTCCCTAGACTTGCCACTGGAATTGATGTAAATCTAAAATTTACGAGAATAGATGATTTTGAATTCACTCCGGAGTGTGCCATATTTGATTTGCTGGACATCCCATTGTATCATGGCTGGATAGTTGATCCGCAGGATCATGATACTGCAACTGCAATTGGATCGAAGTCCTATAATGCCCTTATGGGAGAGCTTGTTTCTCTTGAAACACGGAACATTGAAATCCCACCGAAAAATAATCCGGAAGAAGAAGATTGTGTTGATTTTGTGGCTGCAACAACTGCTGCTCTTGGAGTTCCTTCTCCCAGTCTTTCTAAAGCCAGGTCTTTTGATGATTCTCCACATTCTGTTTCTGATCAGGCACCAAGGAAAGGTGatcttgaagaagaagaagagttgtTGAGAGCCTTGAAGTTGTCTGAGGTTGATTCTAAAGCTTCAATAAGTGATCCTGTGTTGGGTCATGCAAATGATAATGGAGGGGAAGTTGCTTTTGGTATGGACGAAAATGCGTATAACAAACCGTCTGTAACCGTGGATTCTGGAGTTGACTTAGGAAAGAACACTGGTAAAGAAAGCAATGATTCTCATGAATCAGAAACCTCCATACCTGTGTTGGGTCATGCAAATTATAATGGAGGGGAAGTTTCTTTTGGTATGGACGAAAATGCGTGTAACAAACCGGCTGTAACCGTGGATTCTGGAGTTGACTTAGGAAAGAACACTGGTAAAGAAAGCAATGATTCTCATGAATCAGAAACCTCCATACCTGATGATTGTACCGCTTCTAGCAAAGACTATAATGAACATATATCTTCTACATCTACAGTGGGGCAAGCAGCCGAGTCAACCTTAAAGAACGATGCCGTAAGTGACTTCCATCAATCACCTATAGAACCTGAAGAATCTATTGAACAAAATAATGTGGTTGAGAAGCATAACCTTGATGCATTGGTTCAGAATGAGAGTGCAGTCACCCTTTCGCCTGAAAAATATTCTGTTTCTTTTTCTGAGAGCTGTGCAGATGGCACAAGGGGGGATGAAAAAGTTCACAATCAGTCCTATTTTACAACTATAGATCATGAAGTTTCAGATGAATCCCAAGGACCGGATGCAACAGGAGTATCATGCTTATCTGCAAGCCATAAAAATTCAGATTCTTCTAGTATCAGATTTCATCAAACCGATGCTTCTGGAGCATTGCCTTCAGCTGTTGATGGGAGTGAGCCCATGTACGAAGGAGAGGAATGTGTATTGGATACAAGAACTGAAAATATTGAGGATCGTGAACCTGTTTATGAAGGTGAGGCAGTGCTTCAGGAGCAGGCTGACAAAAGCATCTTAGCTAAGGAAGAAATTACTCCAGAACAAGGAGAACTGGTCAAGAGTTTTTTGAGGAATAATGCCAGTCAGTTGACATTTTACGGGCTTTTCAGTCTACAAGATGGTCTTAAAGAGCGCGAGTTGTGTGTTTTTTTCCGAAACAATCATTTCAGCACCATGTTTAAGTTTGAGGGCGAGCTCTATCTTCTAGCTACAGACCAAGGCTACATAACTCAGCCTGATCTGGTTTGGGAAAAACTGAATGAGGTCAATGGTGATACATTGTTTATGACTGGTAATTTCAAGGAATTCAAGGTAGAAAGCCAGGAAAATAACACCTGGGATGAGAGCAGTGTTATGACCAGCACTGCTGACTATCTTGCCAGCATAGAGAGTGCAACACAGGCAGGCTTAGATGCCAATGTCGAGTTGAGTTTCTGA 2145 0.4065 MDMAASTDEPPQDQNQHHDLQHQLQQQQHLSSPLKEFLHKTKSIHFLGRTTPIVLQNDNGPCPLLAICNVLLLRNQLSLSSDIAEVSQEKLLSLVAERLIDSNSNVNNKDAGYVENQQQNISDAIDLLPRLATGIDVNLKFTRIDDFEFTPECAIFDLLDIPLYHGWIVDPQDHDTATAIGSKSYNALMGELVSLETRNIEIPPKNNPEEEDCVDFVAATTAALGVPSPSLSKARSFDDSPHSVSDQAPRKGDLEEEEELLRALKLSEVDSKASISDPVLGHANDNGGEVAFGMDENAYNKPSVTVDSGVDLGKNTGKESNDSHESETSIPVLGHANYNGGEVSFGMDENACNKPAVTVDSGVDLGKNTGKESNDSHESETSIPDDCTASSKDYNEHISSTSTVGQAAESTLKNDAVSDFHQSPIEPEESIEQNNVVEKHNLDALVQNESAVTLSPEKYSVSFSESCADGTRGDEKVHNQSYFTTIDHEVSDESQGPDATGVSCLSASHKNSDSSSIRFHQTDASGALPSAVDGSEPMYEGEECVLDTRTENIEDREPVYEGEAVLQEQADKSILAKEEITPEQGELVKSFLRNNASQLTFYGLFSLQDGLKERELCVFFRNNHFSTMFKFEGELYLLATDQGYITQPDLVWEKLNEVNGDTLFMTGNFKEFKVESQENNTWDESSVMTSTADYLASIESATQAGLDANVELSF 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00316 714 Pfam MINDY deubiquitinase 68 192 IPR033979 GO:0004843|GO:1990380
Tsu05g00316 714 MobiDBLite consensus disorder prediction 272 334 - -
Tsu05g00316 714 PANTHER NF-E2 INDUCIBLE PROTEIN 14 707 IPR007518 GO:0004843|GO:1990380
Tsu05g00316 714 MobiDBLite consensus disorder prediction 383 397 - -
Tsu05g00316 714 MobiDBLite consensus disorder prediction 1 28 - -
Tsu05g00316 714 MobiDBLite consensus disorder prediction 357 397 - -
Tsu05g00316 714 MobiDBLite consensus disorder prediction 228 256 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00316 K01309 - gmx:100808340 866.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00316 05 2367536 2374237 Tsu05g00316 05 2367536 2374237 ECH