Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00267 ATGGGACAAGAGTTGAATCTCAATGAAAAGTCTTGTGTGAGTCTCAGTCCAAATTCTGTTCTTCCATCTCATCAAAACTGTTTGAATGTGAAGGAGAAAGCATATAGAAATGAGAAGTTCAAAGACTATTTTTCTGAGAACAATTCTTCATGCAAGAGCCTTCCATGTAGATCTCATAAACTAGAAGCGCATACCGGAAAGAGACGCGGTTCCATTTATCAGAGTTCAAATCAGGTAATCAATATAAACAAAATGGCCACCATattggaagaaagaaaagaaaggaaaaaaatagaaatttcaaGTAGGACTAGTGATGCCTCTTTTTCTAGTAGTAgcatttttcattctttatgtgattcagatgatgaagattcTATGATATCTCATGATTCAGAGTTGAGTCCTCAGTCTCCATCTGTTTCTGGTTCCTGTGATTGGATGGATTACACCATATCAAGTAGTTTTATAGAATTATGCATAAATTCAGATGTTTGTGAGAAAAAATGTAGTTTTATAGAAGGATTAGGTTctataaattcaaatattagaAGTGATAAGGTTACTAAATCTCTTTTAAGTGGTAATAATTCTCCTCCTCAAAAAGTGGAAATCTCTCACTCTCACCAACCATATCCATCAGAAAGTGATTGTAATTGTACATCAAGAGTGAGTTCAAAAGTCCCATTCACTCCTATCAGAAAAAGGCTAAACCCTTTCACAAAGTCAAAAAATGTTGCAAGAAACATGGCTTGTCAAAAATCATTGTTGAATGACTTTTCCAACACAACAAAAGATGCTGCTGACATGGTTTCTGAATTTGTCAATAAAGATATCATGAATTCTAGTTTAGCATGCTCACCTGTTCATTTGCATGGTAATCTCaagttgaaaaataaacaaggactTCCTTGTTTTGAATTTAAGGTAAATTCTCCTGAAGATGTCTTTGTTGCGAAGACATGGAGAGTAGGTAATGCTTTCAATTGGGTATACACCTTTCACTCTTTTGATAATAGAAAGAAGAACAATGCATGTAGTTTGGGATCTCAACATTGTGAGAAAGACTCATCAATGATAGCACAAATGCTAGTTTCCTATAGTTTATGTTCTGAACTAGAAGATGGAGTATTTGGAAACTATATGGTAACAGAATTTGTGTTGTATGATTTTACACACTCAAGAAAAAGTGCTTCTAAAACTTTGAATGCTTCGGGTCTTGAAAGCGCTGCAATTGTTTTGCGAATTCCGTTTCATAAGAGAGAAAGCATGAAATACATAAGAGGGGATAGAATAAATGCTCAAGCATATTCTGAACCAAGtgatatctcttcaccattagAGCAAGTGAAGGTGGTATTACCAATTGGCAACCATGGTTTGCCAAGCGGTGAAAGCGAGGGTCCTTCATCGTTACTTGATCGATGGAAACATGGTGGGGGTTGTGACTGTGGTGGCTGGGACATGGCCTGTCCCCTTATTCTTTTAGGTAACCCTGGTGTTCAATTTCATGGAGATAGCCCTCTTGTGGAGAACTATCAACCACTCGAACTTTTTTCTCAATCTCAGGGAACCAAAGAAAGTATTCCTACATTTGGCATGACATTAGTTGAAGAGGGGCAATATGCAATTGATTTCCATGCAAAATTATCTCCATTACAAGCTTTCTCCATTTGTGTCGCCATTTTGCATGGCACCTCTGACTTCAGCGCTACGACAGAAAAGGAGAAAAACCAACAGTTATCTCAATACAATTCACTAAATACACTTATTGAAGAGGAAGTAGAACTTTTTGTCAAATCGGTCGCAACAGAAGAGAACAAGACAATATCTAATATTCAAAAGAGAATTCATCGATCATGTTTGCTGAAACCGCCTTTTTCTCCTATTGGTCGAGTATAA 1902 0.3449 MGQELNLNEKSCVSLSPNSVLPSHQNCLNVKEKAYRNEKFKDYFSENNSSCKSLPCRSHKLEAHTGKRRGSIYQSSNQVININKMATILEERKERKKIEISSRTSDASFSSSSIFHSLCDSDDEDSMISHDSELSPQSPSVSGSCDWMDYTISSSFIELCINSDVCEKKCSFIEGLGSINSNIRSDKVTKSLLSGNNSPPQKVEISHSHQPYPSESDCNCTSRVSSKVPFTPIRKRLNPFTKSKNVARNMACQKSLLNDFSNTTKDAADMVSEFVNKDIMNSSLACSPVHLHGNLKLKNKQGLPCFEFKVNSPEDVFVAKTWRVGNAFNWVYTFHSFDNRKKNNACSLGSQHCEKDSSMIAQMLVSYSLCSELEDGVFGNYMVTEFVLYDFTHSRKSASKTLNASGLESAAIVLRIPFHKRESMKYIRGDRINAQAYSEPSDISSPLEQVKVVLPIGNHGLPSGESEGPSSLLDRWKHGGGCDCGGWDMACPLILLGNPGVQFHGDSPLVENYQPLELFSQSQGTKESIPTFGMTLVEEGQYAIDFHAKLSPLQAFSICVAILHGTSDFSATTEKEKNQQLSQYNSLNTLIEEEVELFVKSVATEENKTISNIQKRIHRSCLLKPPFSPIGRV 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00267 633 Pfam Domain of unknown function (DUF3527) 406 565 IPR021916 -
Tsu05g00267 633 Pfam Domain of unknown function (DUF3527) 288 400 IPR021916 -
Tsu05g00267 633 MobiDBLite consensus disorder prediction 193 217 - -
Tsu05g00267 633 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3527)-RELATED 4 401 - -
Tsu05g00267 633 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3527)-RELATED 405 633 - -
Tsu05g00267 633 PANTHER EXPRESSED PROTEIN 4 401 - -
Tsu05g00267 633 PANTHER EXPRESSED PROTEIN 405 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00267 Tsu-Chr5 1977647 1980163 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00267 - - mtr:MTR_5g010160 866.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00267 05 1977647 1980163 Tsu05g00267 05 1977647 1980163 ECH
Tsu05g00267 05 1977647 1980163 Tsu02g00462 02 3874076 3878278 PCT