Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00261 atgaaagattCAGAAAAACTAACAATCACTCCAACGCAATTGCAACAAAGATCTTCACATTCACCAAAGCTTATGCTATGGTTAATCCTCGCTGTTTCTTTAACCTACTTCATCTACACTCTCAAACTCGTTTCAACTTCAACCTCCTGTAACCACACTCCATTCACTACCGTCAACCACCACTCTTCCATTTCCACCACCGTCAACAACACAACCAATTCCACTTCCAGTTCCACTACTTCAACGGAGCTTCGCCACGTCGTATTCGGAATCGCAGCATCATCAAAACTCTGGGAACAGAGAAAAAACTACATAAAACTATGGTACAATTCAAAAAAAATGCGAGGAATAGTTTGGATGGACAATACAgtaaaaaccgatccaaacgaAGATCTTCCACCGGTGAAAATTTCCACCGACACTTCGAATTTTCCTTACACAAACAAACAAGGTCATCGCTCAGCGATTCGGATTTCGCGAATTGTGTCTGAAACGCTGCGTTTAGGACTTAAAGATGTTCGGTGGTTTGTAATGGGAGATGACGACACCGTTTTTGTAACGGAAAATTTAATTAGGGTTTTAAATAAGTATGATTATAATGAGTTTTATTATATTGGGAGTTTATCGGAGAGTCATTTacagaatatatatttttcttatggtATGGCTTATGGTGGTGGTGGATTTGCGATTAGTTATCCATTAGCGAAAGCATTAGTGAAAATGCAAGATCGTTGTATTCATAGATATCCTGGTTTGTATGGTTCTGATGATCGAATGCAAGCTTGTATGGCTGAACTTGGTGTTCCTCTTACTAAAGAAATCGGTTTTCATCAGTATGATGTGTATGGGAACCTGTTTGGGCTTCTTGCAGCTCATCCAGTGACTCCATTGGTATCACTACACCATCTTGATGTCGTTGAGCCGATCTTTCCCAATGCCACAAGAGTAGAAGCACTTCAACGCCTTACTATACCAATGAAGCTTGACTCAGCAGGACTTATTCAACAATCAATCTGCTACGACAAAGAAAAGAGCTGGACGATTTCAGTTTCATGGGGTTTTGCTGTTCAGATATTTCGCGGAATATTTTCACCCCGCGAAATCGAAATGCCTTCAAGAACATTCCTCAATTGGTATAGAAGAGCTGATTACACTGCTTATGCTTTCAACACACGTCCTGTTACTCGAAACCCGTGTCAAAAACCTTTTGTGTTTTACCTTTCAAAGGCAAAATTCAATTCTACAATACAACAGACAGTTAGTGAATATGAAAGGCATCGCGTGCCTCATCCAGCATGTCGATGGAAAATGGCTGATCCTTCTGCTCTTGACAAAGTTGTTGTATATAAGAAACCAGACCCACATCTATGGGATAGGGCTCCAAGGAGAAACTGTTGTAGAGTGATGAAGTCAAATAAGAAAGGTAGAATGGTGATGGATGTTGGTATATGTAAAGATGGTGAGGTCAGTGAACCTTAA 1482 0.3907 MKDSEKLTITPTQLQQRSSHSPKLMLWLILAVSLTYFIYTLKLVSTSTSCNHTPFTTVNHHSSISTTVNNTTNSTSSSTTSTELRHVVFGIAASSKLWEQRKNYIKLWYNSKKMRGIVWMDNTVKTDPNEDLPPVKISTDTSNFPYTNKQGHRSAIRISRIVSETLRLGLKDVRWFVMGDDDTVFVTENLIRVLNKYDYNEFYYIGSLSESHLQNIYFSYGMAYGGGGFAISYPLAKALVKMQDRCIHRYPGLYGSDDRMQACMAELGVPLTKEIGFHQYDVYGNLFGLLAAHPVTPLVSLHHLDVVEPIFPNATRVEALQRLTIPMKLDSAGLIQQSICYDKEKSWTISVSWGFAVQIFRGIFSPREIEMPSRTFLNWYRRADYTAYAFNTRPVTRNPCQKPFVFYLSKAKFNSTIQQTVSEYERHRVPHPACRWKMADPSALDKVVVYKKPDPHLWDRAPRRNCCRVMKSNKKGRMVMDVGICKDGEVSEP 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00261 493 PANTHER FRINGE-RELATED 9 492 - -
Tsu05g00261 493 Gene3D - 74 326 - -
Tsu05g00261 493 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 9 492 - -
Tsu05g00261 493 Pfam Protein of unknown function, DUF604 214 467 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00261 Tsu-Chr5 1933674 1938497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00261 21 492 Glycosyltransferase AT4G23490 70.732 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00261 - - gmx:100795943 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00261 05 1933674 1938497 Tsu05g00261 05 1933674 1938497 ECH