Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00248 ATGGAAGCTTTTAGCTTGCTCAAATACTGGAGAGCAGGTGCTACTATTGTCGGTCTTCCACCTTCCACCAATGattcctccaccaccaccaccaccgtcAACACCACCACCATTCTCACAACCGCTGATACCACCACCAGCAGCAGCGACGATgaagacaacaacaacaacgaaGATGAAGGTCCTTTCTTTGACTTAGAGTTTACTGCaccagaagaagaagaagacaatgTTTCTGAAGAAACCAACCATAACAAccagcaacaacaacaagaaaatgatgatgaagaagatgaagaagaatctgaagaAGGTGATGAGTTTAAGATAACACTATCACCTTCAAACAATGAACGAAGTGATGCAAATCTTTCACTATCTCCTTCAGAAGATTTATTCTTCAAAGGAAAACTAGTTCAGCTTAAACCTTCTTCCTTCATtcttaacaacaacaacaacacttcCGAACCTAACTCCAAACCTCAATTCACTGCTTCATTACTAAAATCTGCAACAAAATTTCGAGTTTTCATGTCTGGTCTCAAGAAACCAAAAACAGATTCTGTTATtacagaaaagaaagaaaaaccagAAAGAAACAGAATCAAATTCAAAGTTGAAGAAGTTCCTATAGTTTCACTTTTCACAAGAGACAATAGTTCCAAAGGAAACATCAACAAGAAACAGAACACAGAACAACATGAACCATTGTCACCTTTGGAAGAGAAACGTTTCACTAAAGATGTAGTTATGCATAAGTATTTGAAAATGGTGAAACCACTTTACATTAGAGTTTCTCGTAGGTATAGTCATGGTGAAAAATCAAGTGAAAAAGTTGAAGCTGAAATAGCGACGGAAGGGGAAACCGTTGTTGAAAGTGAAGAAAACAGTGCAAAGAGACAGAGTCAAAAACAGGGGAATATTCCGGCAGGGCTTAGAGTTGTTTATAAGCATTTAGGAAAGAGCCGTTCTGCGTCGTCAGCTGTGGCGGCTTCTCCGCCGGCGTTAGTTTCGTCGAAACGGCGTGATGATTCACTTTTGCAGCAACAAGATGGGATTCAAGGAGCCATTTTACATTGCAAGAGATCCTTCAATGCTTCTAGAGAATGtgagtcttcttcttcttctcaactACCACGTTCTGTGAGTGATCCATTAACGCGGGAGATGTCACCACCAGAATTGTCAAGGAAATCTAGTGACAAACGACTTTCAGGTTGA 1221 0.3391 MEAFSLLKYWRAGATIVGLPPSTNDSSTTTTTVNTTTILTTADTTTSSSDDEDNNNNEDEGPFFDLEFTAPEEEEDNVSEETNHNNQQQQQENDDEEDEEESEEGDEFKITLSPSNNERSDANLSLSPSEDLFFKGKLVQLKPSSFILNNNNNTSEPNSKPQFTASLLKSATKFRVFMSGLKKPKTDSVITEKKEKPERNRIKFKVEEVPIVSLFTRDNSSKGNINKKQNTEQHEPLSPLEEKRFTKDVVMHKYLKMVKPLYIRVSRRYSHGEKSSEKVEAEIATEGETVVESEENSAKRQSQKQGNIPAGLRVVYKHLGKSRSASSAVAASPPALVSSKRRDDSLLQQQDGIQGAILHCKRSFNASRECESSSSSQLPRSVSDPLTREMSPPELSRKSSDKRLSG 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00248 406 PANTHER MEMBRANE-ASSOCIATED KINASE REGULATOR 2-RELATED 1 391 - -
Tsu05g00248 406 MobiDBLite consensus disorder prediction 273 306 - -
Tsu05g00248 406 PANTHER MEMBRANE-ASSOCIATED KINASE REGULATOR 2-RELATED 1 391 IPR039619 GO:0005886
Tsu05g00248 406 MobiDBLite consensus disorder prediction 92 106 - -
Tsu05g00248 406 Coils Coil 79 106 - -
Tsu05g00248 406 MobiDBLite consensus disorder prediction 109 124 - -
Tsu05g00248 406 MobiDBLite consensus disorder prediction 368 384 - -
Tsu05g00248 406 MobiDBLite consensus disorder prediction 368 406 - -
Tsu05g00248 406 MobiDBLite consensus disorder prediction 52 79 - -
Tsu05g00248 406 MobiDBLite consensus disorder prediction 323 343 - -
Tsu05g00248 406 MobiDBLite consensus disorder prediction 218 233 - -
Tsu05g00248 406 MobiDBLite consensus disorder prediction 19 51 - -
Tsu05g00248 406 MobiDBLite consensus disorder prediction 17 124 - -
Tsu05g00248 406 MobiDBLite consensus disorder prediction 218 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00248 Tsu-Chr5 1818933 1821628 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00248 - - cam:101513332 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00248 05 1818933 1821628 Tsu05g00248 05 1818933 1821628 ECH
Tsu05g00248 05 1818933 1821628 Tsu02g00411 02 3441603 3443481 PCT