Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00245 ATGCAATCACATTCACTCTCTTCGTTTCCCAAACCATTCGCATTATCATCTTTTACTTTTCTTCGCTCTAACACTCTCCAATCTTCATCTTTCGCCACCTCACTCCTCTCTCACTGCAACCGCAATCTACCGCCACCTATTCAAATCGCTAATCTTTTTAGGGACACCACGGGATTCGTTCGTGCTTACAAGCATTACCGCGCTGAATCATATGAACTTCAAAATTCCGATGAATCTGTTGCCGGAAATTCCGATTGTGAATGTGACTTGACAACACCGattgtttcttcttctgatgATAATCATAATGGATCCATAGGACTTGTCAAGTTTATGCTGTTATTTGCTTTCTTCGCATTTCGAGACTCTTATCCTGCTTCTGCTGCTTCTGATTTTGCTACTGGTTTGAATTCGGTTCCTGTATTTGGAGATGTCGGTGACTTAAGCACAGGTTTTGCTTCAGCTTTTCTGCTCATATTTTTCTCTGAACTGGGAGACAAGACATTTTTCATTGCAGCACTGTTAGCAGCTAGGAATTCAGCTGGTGTTGTTTTCATTGGGACATTTGGTGCACTCGCGGCAATGACTGTCATATCTGTCGCTCTTGGACGAACTTTTCATTATGTTGACGAACTCTTGCCGTTCagGTTTGGACAAACTGATTTACCTATTGATGATATTGCTGCTGTTTGCCTATTGGTATACTTTGGTGTTTCTACCCTGCTGGATGCCTCGTCTAGTGATGGCCAAAAATCAGATGATGAACAAAAGGAGGCAGAGTTAGCAGTTTCTGAATTTTCTGGAAACGGTGCTGGGATAGTAGCTGCTGCTAGCACAATTGTCAGCACTTTTCTCTTAGTTTTTGTTGCTGAGTGGGGTGATAAATCATTTTTCTCCACAATTGCCCTTGCAGCAGCTTCTTCACCCCTGGGAGTCATAGCTGGATCACTAGCCGGTCATGGTGTTGCAACTTTGGTAACTCCTTTTTCAGCAATGGTGTGA 1002 0.4222 MQSHSLSSFPKPFALSSFTFLRSNTLQSSSFATSLLSHCNRNLPPPIQIANLFRDTTGFVRAYKHYRAESYELQNSDESVAGNSDCECDLTTPIVSSSDDNHNGSIGLVKFMLLFAFFAFRDSYPASAASDFATGLNSVPVFGDVGDLSTGFASAFLLIFFSELGDKTFFIAALLAARNSAGVVFIGTFGALAAMTVISVALGRTFHYVDELLPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDASSSDGQKSDDEQKEAELAVSEFSGNGAGIVAAASTIVSTFLLVFVAEWGDKSFFSTIALAAASSPLGVIAGSLAGHGVATLVTPFSAMV 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00245 333 Pfam Uncharacterized protein family UPF0016 154 237 IPR001727 -
Tsu05g00245 333 Pfam Uncharacterized protein family UPF0016 282 326 IPR001727 -
Tsu05g00245 333 PANTHER PROTEIN PAM71, CHLOROPLASTIC 74 326 - -
Tsu05g00245 333 ProSitePatterns Uncharacterized protein family UPF0016 signature. 163 172 IPR001727 -
Tsu05g00245 333 PANTHER TRANSMEMBRANE PROTEIN HTP-1 RELATED 74 326 IPR001727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00245 Tsu-Chr5 1798777 1802888 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00245 - - lang:109331470 411.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00245 05 1798777 1802888 Tsu05g00245 05 1798777 1802888 ECH